RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 TBXAS1P24557 533 aaPredicted RBP6.77□□□□□ -1.33
VPS29-210ENST00000552130 PSMA4P25789 261 aaKnown RBP6.77□□□□□ -1.33
VPS29-210ENST00000552130 AKT1P31749 480 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 ZBTB16Q05516 673 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 TMEM62Q0P6H9 643 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 TUSC3Q13454 348 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 MYBPC3Q14896 1274 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 RTP5Q14D33 572 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 GPR68Q15743 365 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 TCP11X2Q5H9J9 407 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 ZBTB41Q5SVQ8 909 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 PRAMEF14Q5SWL7 426 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 TAF2Q6P1X5 1199 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 SLC2A7Q6PXP3 512 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 ATF7IPQ6VMQ6 1270 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 DENND5BQ6ZUT9 1274 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 H1FNTQ75WM6 255 aaPredicted RBP6.77□□□□□ -1.33
VPS29-210ENST00000552130 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.77□□□□□ -1.33
VPS29-210ENST00000552130 TMEM57Q8N5G2 664 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 SH2D3CQ8N5H7 860 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 ZBTB44Q8NCP5 570 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 C3orf20Q8ND61 904 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 ANKRD20A12PQ8NF67 263 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 CSGALNACT1Q8TDX6 532 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 DEPDC1BQ8WUY9 529 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 ZFAND2BQ8WV99 257 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 DLG3Q92796 817 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 NMD3Q96D46 503 aaKnown RBP6.77□□□□□ -1.33
VPS29-210ENST00000552130 ATP6V0BQ99437 205 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 CITED2Q99967 270 aaPredicted RBP6.77□□□□□ -1.33
VPS29-210ENST00000552130 REEP2Q9BRK0 252 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 TWSG1Q9GZX9 223 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 ABHD16BQ9H3Z7 469 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 PNPOQ9NVS9 261 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 ERVK13-1Q9NX77 482 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 RGL1Q9NZL6 768 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 C5AR2Q9P296 337 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 ANAPC5Q9UJX4 755 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 HPCAL4Q9UM19 191 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 KIF3AQ9Y496 699 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 PCDHA3Q9Y5H8 950 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 FAM169AQ9Y6X4 670 aa6.77□□□□□ -1.33
VPS29-210ENST00000552130 A0A0B4J203 849 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 BUB1BO60566 1050 aaPredicted RBP6.76□□□□□ -1.33
VPS29-210ENST00000552130 PRKCBP05771 671 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 TYRP14679 529 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 ENDOUP21128 410 aaKnown RBP6.76□□□□□ -1.33
VPS29-210ENST00000552130 ARL4AP40617 200 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 GPC3P51654 580 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 YBEYP58557 167 aaPredicted RBP6.76□□□□□ -1.33
VPS29-210ENST00000552130 AP2B1P63010 937 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 PLP2Q04941 152 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 DMTNQ08495 405 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 FSTL1Q12841 308 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 ADAM9Q13443 819 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 SPIDRQ14159 915 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 TMEM132BQ14DG7 1078 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 RABEP1Q15276 862 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 ZNF827Q17R98 1081 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 RRAGBQ5VZM2 374 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 CPZQ66K79 652 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 ARL6IP4Q66PJ3 421 aaKnown RBP6.76□□□□□ -1.33
VPS29-210ENST00000552130 FIP1L1Q6UN15 594 aaKnown RBP6.76□□□□□ -1.33
VPS29-210ENST00000552130 RNF44Q7L0R7 432 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 OR1N1Q8NGS0 311 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 OR6Y1Q8NGX8 325 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 SCAMP5Q8TAC9 235 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 CTNNBL1Q8WYA6 563 aaPredicted RBP6.76□□□□□ -1.33
VPS29-210ENST00000552130 MAML1Q92585 1016 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 ZNF75CPQ92670 426 aaPredicted RBP6.76□□□□□ -1.33
VPS29-210ENST00000552130 ATP6V0A1Q93050 837 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 VPS33AQ96AX1 596 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 MAML3Q96JK9 1138 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 CNDP1Q96KN2 507 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 AK8Q96MA6 479 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 DACH2Q96NX9 599 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 GBP5Q96PP8 586 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 GSDMAQ96QA5 445 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 P2RX7Q99572 595 aaKnown RBP6.76□□□□□ -1.33
VPS29-210ENST00000552130 MAGEB5Q9BZ81 275 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 POFUT1Q9H488 388 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 THAP9Q9H5L6 903 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 BRF2Q9HAW0 419 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 PRDM8Q9NQV8 689 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 TAB2Q9NYJ8 693 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 AKAP7Q9P0M2 348 aaPredicted RBP6.76□□□□□ -1.33
VPS29-210ENST00000552130 MYRFQ9Y2G1 1151 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 PCDHA13Q9Y5I0 950 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 HS3ST4Q9Y661 456 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 TAF6LQ9Y6J9 622 aa6.76□□□□□ -1.33
VPS29-210ENST00000552130 A8MXE2 369 aa6.75□□□□□ -1.33
VPS29-210ENST00000552130 H0YAE9 185 aa6.75□□□□□ -1.33
VPS29-210ENST00000552130 MAN2B1O00754 1011 aa6.75□□□□□ -1.33
VPS29-210ENST00000552130 CASQ2O14958 399 aaPredicted RBP6.75□□□□□ -1.33
VPS29-210ENST00000552130 ADAM20O43506 726 aa6.75□□□□□ -1.33
VPS29-210ENST00000552130 SGTAO43765 313 aa6.75□□□□□ -1.33
VPS29-210ENST00000552130 KIF1CO43896 1103 aaKnown RBP6.75□□□□□ -1.33
VPS29-210ENST00000552130 PALMO75781 387 aa6.75□□□□□ -1.33
VPS29-210ENST00000552130 TUBB4AP04350 444 aa6.75□□□□□ -1.33
VPS29-210ENST00000552130 CNPP09543 421 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms