RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CNNM4Q6P4Q7 775 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 VSTM1Q6UX27 236 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 PAQR9Q6ZVX9 377 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 SYT13Q7L8C5 426 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 FILIP1Q7Z7B0 1213 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 ADGRG2Q8IZP9 1017 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 CCDC33Q8N5R6 958 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 OR6B3Q8NGW1 331 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 USP33Q8TEY7 942 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 CHAMP1Q96JM3 812 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 ZC3H10Q96K80 434 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 KCNK16Q96T55 309 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 TPSD1Q9BZJ3 242 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 SDCBP2Q9H190 292 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 SMYD3Q9H7B4 428 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 NXF1Q9UBU9 619 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 PCDHA7Q9UN72 937 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 CPQQ9Y646 472 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 CFAP47Q6ZTR5 3102 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 KLRC4O43908 158 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 TACC1O75410 805 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 OAS1P00973 400 aaKnown RBP12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 BCKDHBP21953 392 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 MPLP40238 635 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 NOP14P78316 857 aaKnown RBP12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 SURF1Q15526 300 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 RHBDF2Q6PJF5 856 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 TMEM92Q6UXU6 159 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 UNC13DQ70J99 1090 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 CAMKK1Q8N5S9 505 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 FRMD1Q8N878 549 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 FSIP1Q8NA03 581 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 IQUBQ8NA54 791 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 XXYLT1Q8NBI6 393 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 SCAMP5Q8TAC9 235 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 LOXL4Q96JB6 756 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 C8orf48Q96LL4 319 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 SNX25Q9H3E2 840 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 TRPM5Q9NZQ8 1165 aa12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 CHORDC1Q9UHD1 332 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 R3HCC1Q9Y3T6 440 aaKnown RBP12.31□□□□□ -0.44
PRPF40B-212ENST00000551111 VNN1O95497 513 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 YEATS4O95619 227 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 OLFM2O95897 454 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 ANXA13P27216 316 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 DGKEP52429 567 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 DLG4P78352 724 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 SLC7A9P82251 487 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 AMPD2Q01433 879 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 ORC1Q13415 861 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 DHCR24Q15392 516 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 FBXO43Q4G163 708 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 N4BP2L1Q5TBK1 243 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 STPG1Q5TH74 334 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 TDRD10Q5VZ19 366 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 SCARA5Q6ZMJ2 495 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 STXBP4Q6ZWJ1 553 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 B3GALNT2Q8NCR0 500 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 ZFRQ96KR1 1074 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 FNBP1Q96RU3 617 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 CUEDC2Q9H467 287 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 KIAA1586Q9HCI6 787 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 CFAP97Q9P2B7 532 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 SERTAD1Q9UHV2 236 aa12.3□□□□□ -0.44
PRPF40B-212ENST00000551111 LRRIQ3A6PVS8 624 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 A8MXQ7 604 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 PATE3B3GLJ2 98 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 TNFRSF10BO14763 440 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 TRIM66O15016 1216 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 TRIM24O15164 1050 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 BEST1O76090 585 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 NFATC1O95644 943 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 APBB3O95704 486 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 C4BPAP04003 597 aaKnown RBP12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 TNNC1P63316 161 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 AMPD3Q01432 767 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 CREB5Q02930 508 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 STK4Q13043 487 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 NR1H3Q13133 447 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 MAPRE1Q15691 268 aaKnown RBP12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 BMT2Q1RMZ1 405 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 RESP18Q5W5W9 173 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 ANO7Q6IWH7 933 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 ALLCQ8N6M5 410 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 C12orf50Q8NA57 414 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 KIAA0895Q8NCT3 520 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 MDGA1Q8NFP4 955 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 PARD3BQ8TEW8 1205 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 RLN3Q8WXF3 142 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 ZNF396Q96N95 335 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 CCSER2Q9H7U1 834 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 HMGXB4Q9UGU5 601 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 EBF1Q9UH73 591 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 CACNA1EQ15878 2313 aa12.29□□□□□ -0.44
PRPF40B-212ENST00000551111 BCLAF3A2AJT9 711 aaKnown RBP12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 SGK1O00141 431 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 GIPC1O14908 333 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 COCHO43405 550 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms