RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 ARL2BPQ9Y2Y0 163 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 UNCXA6NJT0 531 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 E5RJQ4 531 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 PDHXO00330 501 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 HCRTO43612 131 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 SNAI1O95863 264 aaPredicted RBP12.06□□□□□ -0.48
C11orf54-214ENST00000540113 KRT7P08729 469 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 IL9RQ01113 521 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 MKRN3Q13064 507 aaKnown RBP12.06□□□□□ -0.48
C11orf54-214ENST00000540113 SCYL2Q6P3W7 929 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 POLNQ7Z5Q5 900 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 PPIL6Q8IXY8 311 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 NAT8LQ8N9F0 302 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 SPATA18Q8TC71 538 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 EMID1Q96A84 441 aaPredicted RBP12.06□□□□□ -0.48
C11orf54-214ENST00000540113 MS4A4AQ96JQ5 239 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 SMC6Q96SB8 1091 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 MAGEB5Q9BZ81 275 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 UBN1Q9NPG3 1134 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 SHOC2Q9UQ13 582 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 SCN4AP35499 1836 aa12.06□□□□□ -0.48
C11orf54-214ENST00000540113 BTBD19C9JJ37 291 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 IGF2BP3O00425 579 aaKnown RBP eCLIP12.05□□□□□ -0.48
C11orf54-214ENST00000540113 PPEF2O14830 753 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 RBP3P10745 1247 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 KRT4P19013 534 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 CDH6P55285 790 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 MTFR1Q15390 333 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 MARCH8Q5T0T0 291 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 FAXCQ5TGI0 409 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 MTHFD1LQ6UB35 978 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 PPP1R21Q6ZMI0 780 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 FAM183BPQ6ZVS7 135 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 DENND1AQ8TEH3 1009 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 NLRP7Q8WX94 980 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 RXFP2Q8WXD0 754 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 TTC25Q96NG3 672 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 FAM49BQ9NUQ9 324 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 PHTF1Q9UMS5 762 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 STK38LQ9Y2H1 464 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 CITO14578 2027 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 TRIP11Q15643 1979 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 CENPFP49454 3210 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 MAGEB2O15479 319 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 TSPAN1O60635 241 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 RNF8O76064 485 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 ATP6V1G2O95670 118 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 GALNTL6Q49A17 601 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 ZC3H12AQ5D1E8 599 aaKnown RBP12.05□□□□□ -0.48
C11orf54-214ENST00000540113 DARS2Q6PI48 645 aaKnown RBP12.05□□□□□ -0.48
C11orf54-214ENST00000540113 MCRS1Q96EZ8 462 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 FOXP3Q9BZS1 431 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 TSPAN16Q9UKR8 245 aa12.05□□□□□ -0.48
C11orf54-214ENST00000540113 COL1A2P08123 1366 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 MGRN1O60291 552 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 PDGFRAP16234 1089 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 ARL4CP56559 192 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 GEMIN4P57678 1058 aaKnown RBP12.04□□□□□ -0.48
C11orf54-214ENST00000540113 TNFAIP2Q03169 654 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 DPYSL3Q14195 570 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 ZNF268Q14587 947 aaPredicted RBP12.04□□□□□ -0.48
C11orf54-214ENST00000540113 TMEM132DQ14C87 1099 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 LVRNQ6Q4G3 990 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 CYP4V2Q6ZWL3 525 aaPredicted RBP12.04□□□□□ -0.48
C11orf54-214ENST00000540113 PALM2Q8IXS6 379 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 HS6ST3Q8IZP7 471 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 BRI3BPQ8WY22 251 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 PAFAH2Q99487 392 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 ZNF408Q9H9D4 720 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 PSMC3IPQ9P2W1 217 aaPredicted RBP12.04□□□□□ -0.48
C11orf54-214ENST00000540113 CLEC11AQ9Y240 323 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 ACTL7BQ9Y614 415 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 KAT6AQ92794 2004 aa12.04□□□□□ -0.48
C11orf54-214ENST00000540113 H3BRB1 525 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 CHUKO15111 745 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 ADCY6O43306 1168 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 PFKMP08237 780 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 GSTA1P08263 222 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 KRT16P08779 473 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 SMPD1P17405 629 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 TFE3P19532 575 aaPredicted RBP12.03□□□□□ -0.48
C11orf54-214ENST00000540113 ADRA1DP25100 572 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 CCNA1P78396 465 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 BNIP1Q12981 228 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 CA9Q16790 459 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 SMYD5Q6GMV2 418 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 SCUBE3Q8IX30 993 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 RIBC1Q8N443 379 aaPredicted RBP12.03□□□□□ -0.48
C11orf54-214ENST00000540113 CMASQ8NFW8 434 aaPredicted RBP12.03□□□□□ -0.48
C11orf54-214ENST00000540113 GTF3C2Q8WUA4 911 aaPredicted RBP12.03□□□□□ -0.48
C11orf54-214ENST00000540113 B3GNT5Q9BYG0 378 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 TUT1Q9H6E5 874 aaKnown RBP12.03□□□□□ -0.48
C11orf54-214ENST00000540113 VRTNQ9H8Y1 702 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 NOD2Q9HC29 1040 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 DPP3Q9NY33 737 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 KLHL14Q9P2G3 628 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 SLC17A7Q9P2U7 560 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.03□□□□□ -0.48
C11orf54-214ENST00000540113 HES2Q9Y543 173 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 HEY1Q9Y5J3 304 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms