RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 KAT6AQ92794 2004 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 MBLAC1A4D2B0 266 aaPredicted RBP18.75■□□□□ 0.59
GNE-204ENST00000539208 FOXO6A8MYZ6 492 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 RASA4BC9J798 803 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 RASA4O43374 803 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 PSMC4P43686 418 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 MKRN3Q13064 507 aaKnown RBP18.75■□□□□ 0.59
GNE-204ENST00000539208 PDK2Q15119 407 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 NOMO1Q15155 1222 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 BOLA3Q53S33 107 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 OLFML1Q6UWY5 402 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 MAP7D3Q8IWC1 876 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 CNPY4Q8N129 248 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 MGARPQ8TDB4 240 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 TEKT4Q8WW24 435 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 SGSM3Q96HU1 749 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 ELAC2Q9BQ52 826 aaKnown RBP18.75■□□□□ 0.59
GNE-204ENST00000539208 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.75■□□□□ 0.59
GNE-204ENST00000539208 CNTN3Q9P232 1028 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 SNX9Q9Y5X1 595 aa18.75■□□□□ 0.59
GNE-204ENST00000539208 ZNF236Q9UL36 1845 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.74■□□□□ 0.59
GNE-204ENST00000539208 PRPSAP2O60256 369 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 SNX3O60493 162 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 OAS1P00973 400 aaKnown RBP18.74■□□□□ 0.59
GNE-204ENST00000539208 RBP3P10745 1247 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 TSHRP16473 764 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 CDH6P55285 790 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 DPYSL3Q14195 570 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 TMED2Q15363 201 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 CCDC14Q49A88 953 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 SH3PXD2AQ5TCZ1 1133 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 PMF1Q6P1K2 205 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 TTC30AQ86WT1 665 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 ZDHHC17Q8IUH5 632 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 ANKRD42Q8N9B4 389 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 NPLOC4Q8TAT6 608 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 SPATA18Q8TC71 538 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 SLC35F5Q8WV83 523 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 VPS37BQ9H9H4 285 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 SLC5A4Q9NY91 659 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 TCP11X1B4DZS4 312 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 ADCY6O43306 1168 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 F2P00734 622 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 DARSP14868 501 aaKnown RBP18.74■□□□□ 0.59
GNE-204ENST00000539208 AXLP30530 894 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 SLC6A3Q01959 620 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 CBLBQ13191 982 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 EFHC2Q5JST6 749 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 ANKRD22Q5VYY1 191 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 ARHGAP17Q68EM7 881 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 ACOT1Q86TX2 421 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 KAT2BQ92831 832 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 PIWIL1Q96J94 861 aaKnown RBP18.74■□□□□ 0.59
GNE-204ENST00000539208 MAGEB18Q96M61 343 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 RNF157Q96PX1 679 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 TBCBQ99426 244 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 EIF2AQ9BY44 585 aaKnown RBP18.74■□□□□ 0.59
GNE-204ENST00000539208 CXCL16Q9H2A7 254 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 C10orf88Q9H8K7 445 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 CLEC11AQ9Y240 323 aa18.74■□□□□ 0.59
GNE-204ENST00000539208 FAM47DPA6NHR8 397 aa18.73■□□□□ 0.59
GNE-204ENST00000539208 DNM1LO00429 736 aa18.73■□□□□ 0.59
GNE-204ENST00000539208 PRPF4O43172 522 aaKnown RBP eCLIP18.73■□□□□ 0.59
GNE-204ENST00000539208 SMIM10L2AP0DMW4 78 aa18.73■□□□□ 0.59
GNE-204ENST00000539208 SMIM10L2BP0DMW5 78 aa18.73■□□□□ 0.59
GNE-204ENST00000539208 PHBP35232 272 aa18.73■□□□□ 0.59
GNE-204ENST00000539208 GPX6P59796 221 aa18.73■□□□□ 0.59
GNE-204ENST00000539208 C15orf59Q2T9L4 293 aaPredicted RBP18.73■□□□□ 0.59
GNE-204ENST00000539208 SESTD1Q86VW0 696 aa18.73■□□□□ 0.59
GNE-204ENST00000539208 ATP11CQ8NB49 1132 aa18.73■□□□□ 0.59
GNE-204ENST00000539208 KHSRPQ92945 711 aaKnown RBP eCLIP18.73■□□□□ 0.59
GNE-204ENST00000539208 TSPAN18Q96SJ8 248 aa18.73■□□□□ 0.59
GNE-204ENST00000539208 HESX1Q9UBX0 185 aa18.73■□□□□ 0.59
GNE-204ENST00000539208 PPEF2O14830 753 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 STX2P32856 288 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 ROR1Q01973 937 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 MMRN1Q13201 1228 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 FAM71DQ8N9W8 422 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 PYROXD1Q8WU10 500 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 FAM49AQ9H0Q0 323 aaPredicted RBP18.72■□□□□ 0.59
GNE-204ENST00000539208 CDHR5Q9HBB8 845 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 TUBGCP4Q9UGJ1 667 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 ZNF487B1APH4 448 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 H0YHG0 523 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 RGS7P49802 495 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 ZC3H12AQ5D1E8 599 aaKnown RBP18.72■□□□□ 0.59
GNE-204ENST00000539208 HP1BP3Q5SSJ5 553 aaPredicted RBP18.72■□□□□ 0.59
GNE-204ENST00000539208 FNBP1LQ5T0N5 605 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 C9orf57Q5W0N0 161 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 SPRYD7Q5W111 196 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 PSMC3IPQ9P2W1 217 aaPredicted RBP18.72■□□□□ 0.59
GNE-204ENST00000539208 RABGEF1Q9UJ41 708 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 UBQLN1Q9UMX0 589 aaKnown RBP18.72■□□□□ 0.59
GNE-204ENST00000539208 SMG5Q9UPR3 1016 aaKnown RBP18.72■□□□□ 0.59
GNE-204ENST00000539208 GNEQ9Y223 722 aaKnown RBP18.72■□□□□ 0.59
GNE-204ENST00000539208 USP15Q9Y4E8 981 aaPredicted RBP18.72■□□□□ 0.59
GNE-204ENST00000539208 NME7Q9Y5B8 376 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 CLUHO75153 1309 aa18.72■□□□□ 0.59
GNE-204ENST00000539208 SCN1AP35498 2009 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms