RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FTH1P19P0C7X4 201 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 PLA2G2AP14555 144 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 CPEP16870 476 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 EDNRBP24530 442 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 FPR3P25089 353 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 PRDX5P30044 214 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 THBS4P35443 961 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 CPA2P48052 419 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 PGGT1BP53609 377 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 COPB1P53618 953 aaKnown RBP1.13□□□□□ -2.23
COPB1-212ENST00000534771 RRP1P56182 461 aaKnown RBP1.13□□□□□ -2.23
COPB1-212ENST00000534771 LILRA4P59901 499 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 TMPRSS15P98073 1019 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 HSF1Q00613 529 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 E2F1Q01094 437 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 SATB1Q01826 763 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 CFHR1Q03591 330 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 TROAPQ12815 778 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 PRTGQ2VWP7 1150 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 C3orf36Q3SXR2 165 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 DEPDC1Q5TB30 811 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 RGS7BPQ6MZT1 257 aaPredicted RBP1.13□□□□□ -2.23
COPB1-212ENST00000534771 PGM2L1Q6PCE3 622 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 SLC4A10Q6U841 1118 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 B4GALNT4Q76KP1 1039 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 KIAA0907Q7Z7F0 614 aaPredicted RBP1.13□□□□□ -2.23
COPB1-212ENST00000534771 ZNF329Q86UD4 541 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 CAND1Q86VP6 1230 aaKnown RBP1.13□□□□□ -2.23
COPB1-212ENST00000534771 SFTPA1Q8IWL2 248 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 IZUMO1Q8IYV9 350 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 FBXL14Q8N1E6 418 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 CPA6Q8N4T0 437 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 UBR7Q8N806 425 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 C3orf20Q8ND61 904 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 OSCP1Q8WVF1 389 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 ASB5Q8WWX0 329 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 KAT5Q92993 513 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 ATP2A3Q93084 1043 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 RSPRY1Q96DX4 576 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 MED30Q96HR3 178 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 MOGAT1Q96PD6 335 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 ARHGAP39Q9C0H5 1083 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 CAAP1Q9H8G2 361 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 ZBTB40Q9NUA8 1239 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 DECR2Q9NUI1 292 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 HESX1Q9UBX0 185 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 TUBD1Q9UJT1 453 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 ZDHHC8Q9ULC8 765 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 POLHQ9Y253 713 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 KLHL33A6NCF5 533 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 hCG_1984214I3L0E3 225 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 ZC3H11AO75152 810 aaKnown RBP eCLIP1.12□□□□□ -2.23
COPB1-212ENST00000534771 PMPCBO75439 489 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 PIM1P11309 404 aaPredicted RBP1.12□□□□□ -2.23
COPB1-212ENST00000534771 LRPAP1P30533 357 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 GKP32189 559 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 SOX5P35711 763 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 MLH1P40692 756 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 ALDH7A1P49419 539 aaKnown RBP1.12□□□□□ -2.23
COPB1-212ENST00000534771 ENTPD1P49961 510 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 PDE6CP51160 858 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 GYS2P54840 703 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 SUMO2P61956 95 aaKnown RBP1.12□□□□□ -2.23
COPB1-212ENST00000534771 B4GALNT1Q00973 533 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 LTBQ06643 244 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 KLF1Q13351 362 aaPredicted RBP1.12□□□□□ -2.23
COPB1-212ENST00000534771 KEAP1Q14145 624 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 STAT4Q14765 748 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 LARS2Q15031 903 aaKnown RBP1.12□□□□□ -2.23
COPB1-212ENST00000534771 ACAP2Q15057 778 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 SEC23BQ15437 767 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 CYP1B1Q16678 543 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 LY6KQ17RY6 165 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 FAM110CQ1W6H9 321 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 AWAT1Q58HT5 328 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 TAF7LQ5H9L4 462 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 EARS2Q5JPH6 523 aaKnown RBP1.12□□□□□ -2.23
COPB1-212ENST00000534771 DENND2CQ68D51 928 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 VSTM1Q6UX27 236 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 NPM2Q86SE8 214 aaKnown RBP1.12□□□□□ -2.23
COPB1-212ENST00000534771 FAM90A1Q86YD7 464 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 RAB11FIP4Q86YS3 637 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 SPATA2LQ8IUW3 424 aaPredicted RBP1.12□□□□□ -2.23
COPB1-212ENST00000534771 ABRAQ8N0Z2 381 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 WDR66Q8TBY9 1149 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 NSUN6Q8TEA1 469 aaKnown RBP1.12□□□□□ -2.23
COPB1-212ENST00000534771 JADE3Q92613 823 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 NEUROG1Q92886 237 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 COA7Q96BR5 231 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 SLITRK1Q96PX8 696 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 PRR25Q96S07 402 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 TUBB6Q9BUF5 446 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 WDCPQ9H6R7 721 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 ST6GALNAC1Q9NSC7 600 aaPredicted RBP1.12□□□□□ -2.23
COPB1-212ENST00000534771 MGAT4CQ9UBM8 478 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 ICAM5Q9UMF0 924 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 MRPS17Q9Y2R5 130 aaKnown RBP1.12□□□□□ -2.23
COPB1-212ENST00000534771 PCDHA3Q9Y5H8 950 aa1.12□□□□□ -2.23
COPB1-212ENST00000534771 CFAP20Q9Y6A4 193 aaKnown RBP1.12□□□□□ -2.23
COPB1-212ENST00000534771 TTBK1Q5TCY1 1321 aaPredicted RBP1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms