RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 APOBEC3GQ9HC16 384 aaKnown RBP20.31■□□□□ 0.84
PKP3-204ENST00000526971 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.31■□□□□ 0.848e-8■■■■■ 150.8
PKP3-204ENST00000526971 GTSE1Q9NYZ3 720 aa20.31■□□□□ 0.84
PKP3-204ENST00000526971 MAGEC2Q9UBF1 373 aaPredicted RBP20.31■□□□□ 0.84
PKP3-204ENST00000526971 RWDD2AQ9UIY3 292 aa20.31■□□□□ 0.84
PKP3-204ENST00000526971 SPECC1L-ADORA2AF8WAN1 911 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 MAGEA11P43364 429 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 GPR15P49685 360 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 NOP14P78316 857 aaKnown RBP20.3■□□□□ 0.84
PKP3-204ENST00000526971 PPP2R5DQ14738 602 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 DDR2Q16832 855 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 CCDC40Q4G0X9 1142 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 CBWD6Q4V339 395 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 MDH1BQ5I0G3 518 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 CBWD3Q5JTY5 395 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 CBWD5Q5RIA9 395 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 YAF2Q8IY57 180 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 PCED1BQ96HM7 432 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 RAB20Q9NX57 234 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 RAB23Q9ULC3 237 aa20.3■□□□□ 0.84
PKP3-204ENST00000526971 KRT37O76014 449 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 PAPSS2O95340 614 aaPredicted RBP20.29■□□□□ 0.84
PKP3-204ENST00000526971 FGF19O95750 216 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 GNA14O95837 355 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 RETP07949 1114 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 GABRR2P28476 465 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 KPNA1P52294 538 aaPredicted RBP20.29■□□□□ 0.84
PKP3-204ENST00000526971 CYP27A1Q02318 531 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 SIM2Q14190 667 aaPredicted RBP20.29■□□□□ 0.84
PKP3-204ENST00000526971 TAF12Q16514 161 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 GPR158Q5T848 1215 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 B3GALNT2Q8NCR0 500 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 MSANTD3Q96H12 275 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 SRRTQ9BXP5 876 aaKnown RBP20.29■□□□□ 0.84
PKP3-204ENST00000526971 NIF3L1Q9GZT8 377 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 ATXN3LQ9H3M9 355 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 C8orf33Q9H7E9 229 aaPredicted RBP20.29■□□□□ 0.84
PKP3-204ENST00000526971 CYP3A43Q9HB55 503 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 COQ4Q9Y3A0 265 aa20.29■□□□□ 0.84
PKP3-204ENST00000526971 FGFR1OPO95684 399 aaKnown RBP20.28■□□□□ 0.84
PKP3-204ENST00000526971 HMGA1P17096 107 aaKnown RBP20.28■□□□□ 0.84
PKP3-204ENST00000526971 BDNFP23560 247 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 CYP4F8P98187 520 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 TNK2Q07912 1038 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 LRRC32Q14392 662 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 PON2Q15165 354 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 SDHAF4Q5VUM1 108 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 HEATR6Q6AI08 1181 aaKnown RBP20.28■□□□□ 0.84
PKP3-204ENST00000526971 VSTM1Q6UX27 236 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 UNC93AQ86WB7 457 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 SCN4BQ8IWT1 228 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 FAXDC2Q96IV6 333 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 TNIP3Q96KP6 325 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 MED15Q96RN5 788 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 IL21Q9HBE4 155 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 MYO16Q9Y6X6 1858 aa20.28■□□□□ 0.84
PKP3-204ENST00000526971 SLC30A4O14863 429 aa20.27■□□□□ 0.84
PKP3-204ENST00000526971 CSH1P0DML2 217 aa20.27■□□□□ 0.84
PKP3-204ENST00000526971 CSH2P0DML3 217 aa20.27■□□□□ 0.84
PKP3-204ENST00000526971 NDST1P52848 882 aa20.27■□□□□ 0.84
PKP3-204ENST00000526971 MARSP56192 900 aaKnown RBP20.27■□□□□ 0.84
PKP3-204ENST00000526971 CCINQ13939 588 aa20.27■□□□□ 0.84
PKP3-204ENST00000526971 PRR23CQ6ZRP0 262 aa20.27■□□□□ 0.84
PKP3-204ENST00000526971 RALGPS2Q86X27 583 aaPredicted RBP20.27■□□□□ 0.84
PKP3-204ENST00000526971 B3GNT5Q9BYG0 378 aa20.27■□□□□ 0.84
PKP3-204ENST00000526971 SMG9Q9H0W8 520 aaKnown RBP20.27■□□□□ 0.84
PKP3-204ENST00000526971 SEMA4GQ9NTN9 838 aa20.27■□□□□ 0.84
PKP3-204ENST00000526971 USP24Q9UPU5 2620 aa20.27■□□□□ 0.84
PKP3-204ENST00000526971 KIAA1549LQ6ZVL6 1849 aa20.27■□□□□ 0.84
PKP3-204ENST00000526971 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.26■□□□□ 0.83
PKP3-204ENST00000526971 GDF9O60383 454 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 LRP3O75074 770 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 NOL4O94818 638 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 CDC25CP30307 473 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 GRIK1P39086 918 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 FMO5P49326 533 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 NLRP12P59046 1061 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 INCA1Q0VD86 236 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 DPCR1Q3MIW9 517 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 ARHGAP29Q52LW3 1261 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 PKN3Q6P5Z2 889 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 C1orf228Q6PIY5 440 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 ACOT1Q86TX2 421 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 LONP2Q86WA8 852 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 TRIM59Q8IWR1 403 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 CRYBG2Q8N1P7 616 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 NETO1Q8TDF5 533 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 CEP295NLQ96MC4 621 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 ZNF518BQ9C0D4 1074 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 ELOVL4Q9GZR5 314 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 HMGXB4Q9UGU5 601 aa20.26■□□□□ 0.83
PKP3-204ENST00000526971 DPYSL4O14531 572 aa20.25■□□□□ 0.83
PKP3-204ENST00000526971 PMM2O15305 246 aa20.25■□□□□ 0.83
PKP3-204ENST00000526971 ADRB1P08588 477 aa20.25■□□□□ 0.83
PKP3-204ENST00000526971 DGKKQ5KSL6 1271 aa20.25■□□□□ 0.83
PKP3-204ENST00000526971 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.25■□□□□ 0.83
PKP3-204ENST00000526971 FAM160A2Q8N612 972 aaPredicted RBP20.25■□□□□ 0.83
PKP3-204ENST00000526971 STKLD1Q8NE28 680 aa20.25■□□□□ 0.83
PKP3-204ENST00000526971 BPIFB1Q8TDL5 484 aa20.25■□□□□ 0.83
PKP3-204ENST00000526971 TATDN2Q93075 761 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms