RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ORC3Q9UBD5 711 aaPredicted RBP18.78■□□□□ 0.6
PVT1-220ENST00000524165 A0A1W2PQF6 199 aa18.77■□□□□ 0.6
PVT1-220ENST00000524165 CILPO75339 1184 aa18.77■□□□□ 0.6
PVT1-220ENST00000524165 CYP2F1P24903 491 aa18.77■□□□□ 0.6
PVT1-220ENST00000524165 SMTNP53814 917 aa18.77■□□□□ 0.6
PVT1-220ENST00000524165 PREPLQ4J6C6 727 aaPredicted RBP18.77■□□□□ 0.6
PVT1-220ENST00000524165 TIPINQ9BVW5 301 aa18.77■□□□□ 0.6
PVT1-220ENST00000524165 DERAQ9Y315 318 aa18.77■□□□□ 0.6
PVT1-220ENST00000524165 TBC1D3BA6NDS4 549 aa18.76■□□□□ 0.59
PVT1-220ENST00000524165 GOLGA8CPA6NN73 597 aa18.76■□□□□ 0.59
PVT1-220ENST00000524165 TNFSF14O43557 240 aa18.76■□□□□ 0.59
PVT1-220ENST00000524165 OR52Z1P0C646 297 aa18.76■□□□□ 0.59
PVT1-220ENST00000524165 ADH5P11766 374 aa18.76■□□□□ 0.59
PVT1-220ENST00000524165 NDUFV2P19404 249 aa18.76■□□□□ 0.59
PVT1-220ENST00000524165 MAOBP27338 520 aa18.76■□□□□ 0.59
PVT1-220ENST00000524165 NTSR1P30989 418 aa18.76■□□□□ 0.59
PVT1-220ENST00000524165 KCNC4Q03721 635 aa18.76■□□□□ 0.59
PVT1-220ENST00000524165 TMPRSS12Q86WS5 348 aa18.76■□□□□ 0.59
PVT1-220ENST00000524165 RUSC1Q9BVN2 902 aa18.76■□□□□ 0.59
PVT1-220ENST00000524165 CD248Q9HCU0 757 aa18.76■□□□□ 0.59
PVT1-220ENST00000524165 FNDC3AQ9Y2H6 1198 aaKnown RBP18.76■□□□□ 0.59
PVT1-220ENST00000524165 SFI1A8K8P3 1242 aa18.75■□□□□ 0.59
PVT1-220ENST00000524165 ERVH48-1M5A8F1 160 aa18.75■□□□□ 0.59
PVT1-220ENST00000524165 PLK4O00444 970 aa18.75■□□□□ 0.59
PVT1-220ENST00000524165 OGTO15294 1046 aa18.75■□□□□ 0.59
PVT1-220ENST00000524165 TLX3O43711 291 aaPredicted RBP18.75■□□□□ 0.59
PVT1-220ENST00000524165 SLC7A9P82251 487 aa18.75■□□□□ 0.59
PVT1-220ENST00000524165 ORC2Q13416 577 aaPredicted RBP18.75■□□□□ 0.59
PVT1-220ENST00000524165 TMEM132DQ14C87 1099 aa18.75■□□□□ 0.59
PVT1-220ENST00000524165 SUZ12Q15022 739 aaKnown RBP18.75■□□□□ 0.59
PVT1-220ENST00000524165 PTPRNQ16849 979 aa18.75■□□□□ 0.59
PVT1-220ENST00000524165 RINT1Q6NUQ1 792 aa18.75■□□□□ 0.59
PVT1-220ENST00000524165 NUDT18Q6ZVK8 323 aa18.75■□□□□ 0.59
PVT1-220ENST00000524165 C1orf186Q6ZWK4 172 aa18.75■□□□□ 0.59
PVT1-220ENST00000524165 DIS3L2Q8IYB7 885 aaKnown RBP18.75■□□□□ 0.59
PVT1-220ENST00000524165 HNRNPABQ99729 332 aaKnown RBP18.75■□□□□ 0.59
PVT1-220ENST00000524165 DNM3Q9UQ16 869 aa18.75■□□□□ 0.59
PVT1-220ENST00000524165 CTDNEP1O95476 244 aa18.74■□□□□ 0.59
PVT1-220ENST00000524165 PLS3P13797 630 aa18.74■□□□□ 0.59
PVT1-220ENST00000524165 HLA-BQ31612 363 aa18.74■□□□□ 0.59
PVT1-220ENST00000524165 CFAP221Q4G0U5 840 aa18.74■□□□□ 0.59
PVT1-220ENST00000524165 IPO4Q8TEX9 1081 aaKnown RBP18.74■□□□□ 0.59
PVT1-220ENST00000524165 BAP1Q92560 729 aa18.74■□□□□ 0.59
PVT1-220ENST00000524165 FAM212AQ96EL1 285 aa18.74■□□□□ 0.59
PVT1-220ENST00000524165 BICD1Q96G01 975 aa18.74■□□□□ 0.59
PVT1-220ENST00000524165 WBP1Q96G27 269 aa18.74■□□□□ 0.59
PVT1-220ENST00000524165 ACBD6Q9BR61 282 aa18.74■□□□□ 0.59
PVT1-220ENST00000524165 STARD13Q9Y3M8 1113 aa18.74■□□□□ 0.59
PVT1-220ENST00000524165 MEI4A8MW99 385 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 KPNA7A9QM74 516 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 E9PMD0 336 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 DTNBO60941 627 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 FDPSP14324 419 aaKnown RBP18.73■□□□□ 0.59
PVT1-220ENST00000524165 GUCY2CP25092 1073 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 CDC25AP30304 524 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 FXR2P51116 673 aaKnown RBP eCLIP18.73■□□□□ 0.59
PVT1-220ENST00000524165 GAD2Q05329 585 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 PDIA5Q14554 519 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 SV2CQ496J9 727 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 ETFBKMTQ8IXQ9 262 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 ZCCHC9Q8N567 271 aaKnown RBP18.73■□□□□ 0.59
PVT1-220ENST00000524165 ENGASEQ8NFI3 743 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 KCNN1Q92952 543 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 PKMYT1Q99640 499 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 TBC1D14Q9P2M4 693 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 LRWD1Q9UFC0 647 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 CPSF3Q9UKF6 684 aaKnown RBP18.73■□□□□ 0.59
PVT1-220ENST00000524165 HCN2Q9UL51 889 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 BTBD3Q9Y2F9 522 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 C2CD2Q9Y426 696 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 TMEM131Q92545 1883 aa18.73■□□□□ 0.59
PVT1-220ENST00000524165 H0YCG3 227 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 PFKFB2O60825 505 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 OLFM2O95897 454 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 CD6P30203 668 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 WASP42768 502 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 LIG4P49917 911 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 BNC1Q01954 994 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 INTS6LQ5JSJ4 861 aaKnown RBP18.72■□□□□ 0.59
PVT1-220ENST00000524165 C10orf76Q5T2E6 689 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 C6orf118Q5T5N4 469 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 SDE2Q6IQ49 451 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 MIB1Q86YT6 1006 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 TERB1Q8NA31 727 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 CADM4Q8NFZ8 388 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 SNIP1Q8TAD8 396 aaKnown RBP18.72■□□□□ 0.59
PVT1-220ENST00000524165 FUBP3Q96I24 572 aaKnown RBP eCLIP18.72■□□□□ 0.59
PVT1-220ENST00000524165 TM6SF1Q9BZW5 370 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 ASB7Q9H672 318 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 CD93Q9NPY3 652 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 IGSF5Q9NSI5 407 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 TRPM5Q9NZQ8 1165 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 DEC1Q9P2X7 70 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 CPQQ9Y646 472 aa18.72■□□□□ 0.59
PVT1-220ENST00000524165 MYLKQ15746 1914 aa18.71■□□□□ 0.59
PVT1-220ENST00000524165 BCAT2O15382 392 aaPredicted RBP18.71■□□□□ 0.59
PVT1-220ENST00000524165 SEMG2Q02383 582 aa18.71■□□□□ 0.59
PVT1-220ENST00000524165 SRSF1Q07955 248 aaKnown RBP eCLIP18.71■□□□□ 0.59
PVT1-220ENST00000524165 LY6G5CQ5SRR4 150 aa18.71■□□□□ 0.59
PVT1-220ENST00000524165 BTBD8Q5XKL5 378 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms