RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 CDO1Q16878 200 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 ZDHHC17Q8IUH5 632 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 SLC43A3Q8NBI5 491 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 ZNF296Q8WUU4 475 aaPredicted RBP17.67■□□□□ 0.42
SREK1-212ENST00000522912 ARL8AQ96BM9 186 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 RUFY1Q96T51 708 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 DNPEPQ9ULA0 475 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 TIMM13Q9Y5L4 95 aaPredicted RBP17.67■□□□□ 0.42
SREK1-212ENST00000522912 NFS1Q9Y697 457 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 FKTNO75072 461 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 GAS8O95995 478 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 KRT14P02533 472 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 LCP1P13796 627 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 CDR1P51861 262 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 HTRA3P83110 453 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 ATP11AP98196 1134 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 MBTPS1Q14703 1052 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 DRICH1Q6PGQ1 229 aaPredicted RBP17.67■□□□□ 0.42
SREK1-212ENST00000522912 SLAIN1Q8ND83 568 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 HSPH1Q92598 858 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 CYLDQ9NQC7 956 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 DDX43Q9NXZ2 648 aaKnown RBP17.67■□□□□ 0.42
SREK1-212ENST00000522912 WHRNQ9P202 907 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 ASIC3Q9UHC3 531 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 ADAM21Q9UKJ8 722 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 EFR3BQ9Y2G0 817 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 ATP8A1Q9Y2Q0 1164 aa17.67■□□□□ 0.42
SREK1-212ENST00000522912 CAND2O75155 1236 aa17.66■□□□□ 0.42
SREK1-212ENST00000522912 MTMR3Q13615 1198 aa17.66■□□□□ 0.42
SREK1-212ENST00000522912 DSTYKQ6XUX3 929 aa17.66■□□□□ 0.42
SREK1-212ENST00000522912 ZNF598Q86UK7 904 aaKnown RBP17.66■□□□□ 0.42
SREK1-212ENST00000522912 RTN4RL1Q86UN2 441 aaPredicted RBP17.66■□□□□ 0.42
SREK1-212ENST00000522912 ECHDC2Q86YB7 292 aa17.66■□□□□ 0.42
SREK1-212ENST00000522912 KCTD6Q8NC69 237 aa17.66■□□□□ 0.42
SREK1-212ENST00000522912 UBLCP1Q8WVY7 318 aaPredicted RBP17.66■□□□□ 0.42
SREK1-212ENST00000522912 HAUS1Q96CS2 278 aa17.66■□□□□ 0.42
SREK1-212ENST00000522912 HSFY1Q96LI6 401 aa17.66■□□□□ 0.42
SREK1-212ENST00000522912 DUSP16Q9BY84 665 aa17.66■□□□□ 0.42
SREK1-212ENST00000522912 CRTAC1Q9NQ79 661 aa17.66■□□□□ 0.42
SREK1-212ENST00000522912 XPO1O14980 1071 aaKnown RBP17.65■□□□□ 0.42
SREK1-212ENST00000522912 BEST1O76090 585 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 GRK4P32298 578 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 BYSLQ13895 437 aaKnown RBP17.65■□□□□ 0.42
SREK1-212ENST00000522912 TIGD5Q53EQ6 642 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 TTMPQ5BVD1 217 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 MDH1BQ5I0G3 518 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 SLC26A9Q7LBE3 791 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 PRUNE1Q86TP1 453 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 TMEM86AQ8N2M4 240 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 OR2W6PQ8NHA6 318 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 PGBD4Q96DM1 585 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.65■□□□□ 0.42
SREK1-212ENST00000522912 TSC2P49815 1807 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 GOLGA8KD6RF30 607 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 TFE3P19532 575 aaPredicted RBP17.65■□□□□ 0.42
SREK1-212ENST00000522912 KLRC2P26717 231 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 SDC4P31431 198 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 ACADSBP45954 432 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 LHX1P48742 406 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 CD300LGQ6UXG3 332 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 LRIG3Q6UXM1 1119 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 PIGZQ86VD9 579 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 FAM172AQ8WUF8 416 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 SNF8Q96H20 258 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 EPB41L4BQ9H329 900 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 FAM204AQ9H8W3 233 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 NGRNQ9NPE2 291 aaKnown RBP17.65■□□□□ 0.42
SREK1-212ENST00000522912 STARD7Q9NQZ5 370 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 MTRF1LQ9UGC7 380 aaKnown RBP17.65■□□□□ 0.42
SREK1-212ENST00000522912 INPP5FQ9Y2H2 1132 aa17.65■□□□□ 0.42
SREK1-212ENST00000522912 I3L4J1 428 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 CST8O60676 142 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 ENDOD1O94919 500 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 ITIH2P19823 946 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 SCNN1AP37088 669 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 VPS41P49754 854 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 ARSEP51690 589 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 DYNLT1P63172 113 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 GRIK3Q13003 919 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 OASLQ15646 514 aaKnown RBP17.64■□□□□ 0.41
SREK1-212ENST00000522912 RHBDF2Q6PJF5 856 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 BBS12Q6ZW61 710 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 SYT15Q9BQS2 421 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 ADAM33Q9BZ11 813 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 FAM129AQ9BZQ8 928 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 SAE1Q9UBE0 346 aaPredicted RBP17.64■□□□□ 0.41
SREK1-212ENST00000522912 DRG1Q9Y295 367 aaKnown RBP17.64■□□□□ 0.41
SREK1-212ENST00000522912 PTCH2Q9Y6C5 1203 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 PRPSAP2O60256 369 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 SKIP12755 728 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 ATF2P15336 505 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 NPR3P17342 541 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 PMS2P54278 862 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 VCPP55072 806 aaKnown RBP17.64■□□□□ 0.41
SREK1-212ENST00000522912 CALCOCO2Q13137 446 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 MMRN1Q13201 1228 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 PAN2Q504Q3 1202 aaKnown RBP17.64■□□□□ 0.41
SREK1-212ENST00000522912 CLEC20AQ6ZU45 233 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 ZNF365Q70YC5 407 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 GOLGA6L1Q8N7Z2 621 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms