RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SLC27A1Q6PCB7 646 aa19.2■□□□□ 0.66
SDC2-202ENST00000518385 TMEM192Q8IY95 271 aa19.2■□□□□ 0.66
SDC2-202ENST00000518385 CXorf38Q8TB03 319 aa19.2■□□□□ 0.66
SDC2-202ENST00000518385 ZNF398Q8TD17 642 aa19.2■□□□□ 0.66
SDC2-202ENST00000518385 TGS1Q96RS0 853 aaKnown RBP19.2■□□□□ 0.66
SDC2-202ENST00000518385 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.2■□□□□ 0.665e-8■□□□□ 10
SDC2-202ENST00000518385 LHX5Q9H2C1 402 aa19.2■□□□□ 0.66
SDC2-202ENST00000518385 CDHR5Q9HBB8 845 aa19.2■□□□□ 0.66
SDC2-202ENST00000518385 AAASQ9NRG9 546 aa19.2■□□□□ 0.66
SDC2-202ENST00000518385 ASIC3Q9UHC3 531 aa19.2■□□□□ 0.66
SDC2-202ENST00000518385 SMG5Q9UPR3 1016 aaKnown RBP19.2■□□□□ 0.66
SDC2-202ENST00000518385 TMEM110-MUSTN1A8MSY1 372 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 PPP1R12AO14974 1030 aaPredicted RBP19.19■□□□□ 0.66
SDC2-202ENST00000518385 CSDE1O75534 798 aaKnown RBP19.19■□□□□ 0.66
SDC2-202ENST00000518385 KRT19P08727 400 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 DARSP14868 501 aaKnown RBP19.19■□□□□ 0.66
SDC2-202ENST00000518385 CETN2P41208 172 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 YARSP54577 528 aaKnown RBP19.19■□□□□ 0.66
SDC2-202ENST00000518385 TMEM62Q0P6H9 643 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 CATSPER4Q7RTX7 472 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 ZDHHC14Q8IZN3 488 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 ARRDC4Q8NCT1 418 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.19■□□□□ 0.66
SDC2-202ENST00000518385 CFAP57Q96MR6 1250 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 TUBB6Q9BUF5 446 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 PHACTR1Q9C0D0 580 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 LRMDAQ9H2I8 198 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 ANAPC5Q9UJX4 755 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 KIAA1257Q9ULG3 409 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 CORO1CQ9ULV4 474 aaPredicted RBP19.19■□□□□ 0.66
SDC2-202ENST00000518385 USH1CQ9Y6N9 552 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 PRPF4O43172 522 aaKnown RBP eCLIP19.19■□□□□ 0.669e-6■□□□□ 10.5
SDC2-202ENST00000518385 PROSCO94903 275 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 POLR2BP30876 1174 aaKnown RBP19.19■□□□□ 0.66
SDC2-202ENST00000518385 RNASELQ05823 741 aaKnown RBP19.19■□□□□ 0.66
SDC2-202ENST00000518385 PTPN11Q06124 597 aaPredicted RBP19.19■□□□□ 0.66
SDC2-202ENST00000518385 MAMLD1Q13495 774 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 CCNG2Q16589 344 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 WDR72Q3MJ13 1102 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 FAM47CQ5HY64 1035 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 TBC1D31Q96DN5 1066 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 UNC93B1Q9H1C4 597 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 SSU72Q9NP77 194 aaKnown RBP19.19■□□□□ 0.66
SDC2-202ENST00000518385 STRIP2Q9ULQ0 834 aa19.19■□□□□ 0.66
SDC2-202ENST00000518385 FAM47DPA6NHR8 397 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 PSTPIP1O43586 416 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 ITGB3P05106 788 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 WEE2P0C1S8 567 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 CD58P19256 250 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 IVDP26440 423 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 SLCO1A2P46721 670 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 MARCKSL1P49006 195 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 CRYBB1P53674 252 aaPredicted RBP19.18■□□□□ 0.66
SDC2-202ENST00000518385 ITGA7Q13683 1181 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 LONRF1Q17RB8 773 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 WASHC2DQ5SRD0 308 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 SERINC5Q86VE9 423 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 CCDC25Q86WR0 208 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 FEZF2Q8TBJ5 459 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 C11orf70Q9BRQ4 267 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 DCLK3Q9C098 648 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 KCNK9Q9NPC2 374 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 DPP3Q9NY33 737 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 NXF1Q9UBU9 619 aaKnown RBP19.18■□□□□ 0.66
SDC2-202ENST00000518385 FETUBQ9UGM5 382 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 IP6K2Q9UHH9 426 aa19.18■□□□□ 0.66
SDC2-202ENST00000518385 CALCAP01258 141 aa19.17■□□□□ 0.66
SDC2-202ENST00000518385 RPLP2P05387 115 aaKnown RBP19.17■□□□□ 0.66
SDC2-202ENST00000518385 HOXA11P31270 313 aaPredicted RBP19.17■□□□□ 0.66
SDC2-202ENST00000518385 KCNJ2P63252 427 aa19.17■□□□□ 0.66
SDC2-202ENST00000518385 HPDLQ96IR7 371 aa19.17■□□□□ 0.66
SDC2-202ENST00000518385 GLT1D1Q96MS3 346 aa19.17■□□□□ 0.66
SDC2-202ENST00000518385 OSMRQ99650 979 aa19.17■□□□□ 0.66
SDC2-202ENST00000518385 PAK6Q9NQU5 681 aaPredicted RBP19.17■□□□□ 0.66
SDC2-202ENST00000518385 EURLQ9NYK6 297 aa19.17■□□□□ 0.66
SDC2-202ENST00000518385 NINJ2Q9NZG7 142 aa19.17■□□□□ 0.66
SDC2-202ENST00000518385 TRAFD1O14545 582 aaPredicted RBP19.16■□□□□ 0.66
SDC2-202ENST00000518385 SPARCL1Q14515 664 aa19.16■□□□□ 0.66
SDC2-202ENST00000518385 ZC3H12AQ5D1E8 599 aaKnown RBP19.16■□□□□ 0.66
SDC2-202ENST00000518385 DRICH1Q6PGQ1 229 aaPredicted RBP19.16■□□□□ 0.66
SDC2-202ENST00000518385 BZW1Q7L1Q6 419 aaKnown RBP19.16■□□□□ 0.66
SDC2-202ENST00000518385 RSPH3Q86UC2 560 aa19.16■□□□□ 0.66
SDC2-202ENST00000518385 PASD1Q8IV76 773 aa19.16■□□□□ 0.66
SDC2-202ENST00000518385 WDR35Q9P2L0 1181 aa19.16■□□□□ 0.66
SDC2-202ENST00000518385 GINS2Q9Y248 185 aa19.16■□□□□ 0.66
SDC2-202ENST00000518385 RALGAPA2Q2PPJ7 1873 aa19.16■□□□□ 0.66
SDC2-202ENST00000518385 CILPO75339 1184 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 NPTXRO95502 500 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 ACSL3O95573 720 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 CFHP08603 1231 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 BRD2P25440 801 aaKnown RBP19.15■□□□□ 0.66
SDC2-202ENST00000518385 ITGA8P53708 1063 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 RAD23BP54727 409 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 INCA1Q0VD86 236 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 BLMHQ13867 455 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 SNX17Q15036 470 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 STILQ15468 1287 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 ACCSLQ4AC99 568 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 SCARA3Q6AZY7 606 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 AADACL2Q6P093 401 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms