RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 OLFM2O95897 454 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 PFKFB1P16118 471 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 CASP4P49662 377 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 KRT85P78386 507 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 TAF10Q12962 218 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 SRSF5Q13243 272 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 SGSM1Q2NKQ1 1148 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 SYT13Q7L8C5 426 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 PLEKHO2Q8TD55 490 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 TMC2Q8TDI7 906 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 TAF4BQ92750 862 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 CCDC47Q96A33 483 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 SPATA32Q96LK8 384 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 ZNF518BQ9C0D4 1074 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 LINC00597Q9H2U6 94 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 KCTD10Q9H3F6 313 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 SEMA4GQ9NTN9 838 aa21.23■□□□□ 0.99
UBE2D3-220ENST00000505307 MED19A0JLT2 244 aaPredicted RBP21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 IKBKBO14920 756 aa21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 RPP40O75818 363 aaKnown RBP21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 CLSTN1O94985 981 aa21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 OAS1P00973 400 aaKnown RBP21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 YWHAQP27348 245 aa21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 ATXN1P54253 815 aaKnown RBP21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 CACNA2D4Q7Z3S7 1137 aa21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 FAM160A2Q8N612 972 aaPredicted RBP21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 SPRYD3Q8NCJ5 442 aa21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 NETO1Q8TDF5 533 aa21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 COMMD8Q9NX08 183 aa21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 HPSEQ9Y251 543 aa21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 FRMD4BQ9Y2L6 1034 aa21.22■□□□□ 0.99
UBE2D3-220ENST00000505307 A0A1B0GVL5 298 aa21.21■□□□□ 0.99
UBE2D3-220ENST00000505307 CALUO43852 315 aaPredicted RBP21.21■□□□□ 0.99
UBE2D3-220ENST00000505307 ABL1P00519 1130 aa21.21■□□□□ 0.99
UBE2D3-220ENST00000505307 NR3C1P04150 777 aa21.21■□□□□ 0.99
UBE2D3-220ENST00000505307 TRIM21P19474 475 aaKnown RBP21.21■□□□□ 0.99
UBE2D3-220ENST00000505307 ZACNQ401N2 412 aa21.21■□□□□ 0.99
UBE2D3-220ENST00000505307 RNF38Q9H0F5 515 aa21.21■□□□□ 0.99
UBE2D3-220ENST00000505307 SMYD3Q9H7B4 428 aa21.21■□□□□ 0.99
UBE2D3-220ENST00000505307 DMAP1Q9NPF5 467 aaPredicted RBP21.21■□□□□ 0.99
UBE2D3-220ENST00000505307 ATP6V1DQ9Y5K8 247 aa21.21■□□□□ 0.99
UBE2D3-220ENST00000505307 CPQQ9Y646 472 aa21.21■□□□□ 0.99
UBE2D3-220ENST00000505307 FAM237AA0A1B0GTK4 181 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 CLDN5O00501 218 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 MAPK13O15264 365 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 CCDC192P0DO97 292 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 SYKP43405 635 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 CACNA2D1P54289 1103 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 CDH8P55286 799 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 ZXDBP98169 803 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 PRR23CQ6ZRP0 262 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 RPLP0P6Q8NHW5 317 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 FBXO32Q969P5 355 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 SMARCD1Q96GM5 515 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 MED10Q9BTT4 135 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 TMEM30AQ9NV96 361 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 IL37Q9NZH6 218 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 TBC1D14Q9P2M4 693 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 TRAF3IP3Q9Y228 551 aa21.2■□□□□ 0.98
UBE2D3-220ENST00000505307 AXIN1O15169 862 aa21.19■□□□□ 0.98
UBE2D3-220ENST00000505307 VNN1O95497 513 aa21.19■□□□□ 0.98
UBE2D3-220ENST00000505307 APBB3O95704 486 aa21.19■□□□□ 0.98
UBE2D3-220ENST00000505307 PXNP49023 591 aaPredicted RBP21.19■□□□□ 0.98
UBE2D3-220ENST00000505307 SNX30Q5VWJ9 437 aa21.19■□□□□ 0.98
UBE2D3-220ENST00000505307 NAIF1Q69YI7 327 aaPredicted RBP21.19■□□□□ 0.98
UBE2D3-220ENST00000505307 FAM35AQ86V20 835 aa21.19■□□□□ 0.98
UBE2D3-220ENST00000505307 UNC93AQ86WB7 457 aa21.19■□□□□ 0.98
UBE2D3-220ENST00000505307 ADGRG2Q8IZP9 1017 aa21.19■□□□□ 0.98
UBE2D3-220ENST00000505307 EBF1Q9UH73 591 aa21.19■□□□□ 0.98
UBE2D3-220ENST00000505307 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.19■□□□□ 0.98
UBE2D3-220ENST00000505307 HELZP42694 1942 aaKnown RBP21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 SLC30A4O14863 429 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 RHOBTB3O94955 611 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 MBL2P11226 248 aaPredicted RBP21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 EIF2DP41214 584 aaKnown RBP21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 RAP1GAPP47736 663 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 TUBP50607 506 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 ENPEPQ07075 957 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 IFRD2Q12894 506 aaPredicted RBP21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 DMC1Q14565 340 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 NFIL3Q16649 462 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 HECTD3Q5T447 861 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 CEP135Q66GS9 1140 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 SV2AQ7L0J3 742 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 FILIP1Q7Z7B0 1213 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 CRYBG2Q8N1P7 616 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 EZH1Q92800 747 aaPredicted RBP21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 OTUB2Q96DC9 234 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 ZC3H10Q96K80 434 aaKnown RBP21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 KCNK16Q96T55 309 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 SCAND2PQ9GZW5 306 aaPredicted RBP21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 SMPD4Q9NXE4 827 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 PCDHGA5Q9Y5G8 931 aa21.18■□□□□ 0.98
UBE2D3-220ENST00000505307 E2F8A0AVK6 867 aa21.17■□□□□ 0.98
UBE2D3-220ENST00000505307 FAM92AA1XBS5 289 aa21.17■□□□□ 0.98
UBE2D3-220ENST00000505307 TNFRSF10BO14763 440 aa21.17■□□□□ 0.98
UBE2D3-220ENST00000505307 ADH1CP00326 375 aa21.17■□□□□ 0.98
UBE2D3-220ENST00000505307 ASS1P00966 412 aaKnown RBP21.17■□□□□ 0.98
UBE2D3-220ENST00000505307 CYP17A1P05093 508 aa21.17■□□□□ 0.98
UBE2D3-220ENST00000505307 HOXC13P31276 330 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms