RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 ZNF410Q86VK4 478 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 PPIL6Q8IXY8 311 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 NT5C1AQ9BXI3 368 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 UBN1Q9NPG3 1134 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 GPR32O75388 356 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 CD48P09326 243 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 CTCFP49711 727 aaPredicted RBP15.48■□□□□ 0.07
CHTOP-206ENST00000495554 TMEM62Q0P6H9 643 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 PDIA2Q13087 525 aaKnown RBP15.48■□□□□ 0.07
CHTOP-206ENST00000495554 TMED2Q15363 201 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 HIF1AQ16665 826 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 DPH6Q7L8W6 267 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 UBA3Q8TBC4 463 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 CCDC97Q96F63 343 aaPredicted RBP15.48■□□□□ 0.07
CHTOP-206ENST00000495554 VPS37BQ9H9H4 285 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 RSAD1Q9HA92 442 aa15.48■□□□□ 0.07
CHTOP-206ENST00000495554 IGF2BP3O00425 579 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHTOP-206ENST00000495554 STX2P32856 288 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 PSMC4P43686 418 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 GDF10P55107 478 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 STILQ15468 1287 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 SPRED3Q2MJR0 410 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 RFX6Q8HWS3 928 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 HSPH1Q92598 858 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 CNPY3Q9BT09 278 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 TRIP11Q15643 1979 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 RRN3P2A6NIE6 340 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 SMAPO00193 183 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 ZNF865P0CJ78 1059 aaPredicted RBP15.47■□□□□ 0.07
CHTOP-206ENST00000495554 GPD1P21695 349 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 GCAP28676 217 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 GRM5P41594 1212 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 SCTRP47872 440 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 RASA2Q15283 850 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 HP1BP3Q5SSJ5 553 aaPredicted RBP15.47■□□□□ 0.07
CHTOP-206ENST00000495554 NUGGCQ68CJ6 796 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 TRABD2AQ86V40 505 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 CPT1BQ92523 772 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 LENG1Q96BZ8 264 aaPredicted RBP15.47■□□□□ 0.07
CHTOP-206ENST00000495554 KIF12Q96FN5 646 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 CALN1Q9BXU9 219 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 MLXIPLQ9NP71 852 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 FGFR1OP2Q9NVK5 253 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 TSPAN16Q9UKR8 245 aa15.47■□□□□ 0.07
CHTOP-206ENST00000495554 FAM47DPA6NHR8 397 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 F2P00734 622 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 PAX7P23759 505 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 ARL4CP56559 192 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 MAP2K5Q13163 448 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 OLFML2BQ68BL8 750 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 GDAP1Q8TB36 358 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 MAGEB18Q96M61 343 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 FAM49AQ9H0Q0 323 aaPredicted RBP15.46■□□□□ 0.07
CHTOP-206ENST00000495554 SENP1Q9P0U3 644 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 SLC24A2Q9UI40 661 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 USP15Q9Y4E8 981 aaPredicted RBP15.46■□□□□ 0.07
CHTOP-206ENST00000495554 CITO14578 2027 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 C2CD4BA6NLJ0 364 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 POC1B-GALNT4F8VUJ3 575 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 MCF2LO15068 1137 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 ENDOD1O94919 500 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 OAS1P00973 400 aaKnown RBP15.46■□□□□ 0.07
CHTOP-206ENST00000495554 SMIM10L2AP0DMW4 78 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 SMIM10L2BP0DMW5 78 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 PDGFRAP16234 1089 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 RPL22P35268 128 aaKnown RBP15.46■□□□□ 0.07
CHTOP-206ENST00000495554 EIF3EP60228 445 aaKnown RBP15.46■□□□□ 0.07
CHTOP-206ENST00000495554 TAF5Q15542 800 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 DCAF4L1Q3SXM0 396 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 NAT8LQ8N9F0 302 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 ZMAT2Q96NC0 199 aaKnown RBP15.46■□□□□ 0.07
CHTOP-206ENST00000495554 MAK16Q9BXY0 300 aaKnown RBP15.46■□□□□ 0.07
CHTOP-206ENST00000495554 PLEKHA5Q9HAU0 1116 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 GINS2Q9Y248 185 aa15.46■□□□□ 0.07
CHTOP-206ENST00000495554 MBLAC1A4D2B0 266 aaPredicted RBP15.45■□□□□ 0.06
CHTOP-206ENST00000495554 E5RJQ4 531 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 GOLGA8MH3BSY2 632 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 HNRNPH1P31943 449 aaKnown RBP15.45■□□□□ 0.06
CHTOP-206ENST00000495554 SLC18A1P54219 525 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 ADAM17P78536 824 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 CCL14Q16627 93 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 OR6B2Q6IFH4 312 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 TRPM8Q7Z2W7 1104 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 APBB1IPQ7Z5R6 666 aaPredicted RBP15.45■□□□□ 0.06
CHTOP-206ENST00000495554 SDR16C5Q8N3Y7 309 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 SPATA18Q8TC71 538 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 RXFP2Q8WXD0 754 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 TGS1Q96RS0 853 aaKnown RBP15.45■□□□□ 0.06
CHTOP-206ENST00000495554 C10orf88Q9H8K7 445 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 SLC5A4Q9NY91 659 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 DERAQ9Y315 318 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 NRCAMQ92823 1304 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 SUN1O94901 812 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 NPTXRO95502 500 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 RBP3P10745 1247 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 CYP3A5P20815 502 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 STIP1P31948 543 aaKnown RBP15.45■□□□□ 0.06
CHTOP-206ENST00000495554 PHBP35232 272 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 HUNKP57058 714 aa15.45■□□□□ 0.06
CHTOP-206ENST00000495554 IL9RQ01113 521 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms