RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 RRP8O43159 456 aaKnown RBP16.36■□□□□ 0.21
U2AF1-211ENST00000486519 TNFSF14O43557 240 aa16.36■□□□□ 0.21
U2AF1-211ENST00000486519 NDUFS2O75306 463 aa16.36■□□□□ 0.21
U2AF1-211ENST00000486519 KCNB1Q14721 858 aa16.36■□□□□ 0.21
U2AF1-211ENST00000486519 IPO4Q8TEX9 1081 aaKnown RBP16.36■□□□□ 0.21
U2AF1-211ENST00000486519 RUSC1Q9BVN2 902 aa16.36■□□□□ 0.21
U2AF1-211ENST00000486519 IGSF5Q9NSI5 407 aa16.36■□□□□ 0.21
U2AF1-211ENST00000486519 AK5Q9Y6K8 562 aa16.36■□□□□ 0.21
U2AF1-211ENST00000486519 NUMA1Q14980 2115 aa16.36■□□□□ 0.21
U2AF1-211ENST00000486519 NBPF19A0A087WUL8 3843 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 MEI4A8MW99 385 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 CER1O95813 267 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 CLTAP09496 248 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 ADH5P11766 374 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 EIF2DP41214 584 aaKnown RBP16.35■□□□□ 0.21
U2AF1-211ENST00000486519 PPP2R3AQ06190 1150 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 SYCP2LQ5T4T6 812 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 SCARA3Q6AZY7 606 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 LAYNQ6UX15 382 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 ETFBKMTQ8IXQ9 262 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 MRGPRX1Q96LB2 322 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 KIF2CQ99661 725 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 CPNE5Q9HCH3 593 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 DAXXQ9UER7 740 aaPredicted RBP16.35■□□□□ 0.21
U2AF1-211ENST00000486519 PCDHGB2Q9Y5G2 931 aa16.35■□□□□ 0.21
U2AF1-211ENST00000486519 TBC1D3BA6NDS4 549 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 CAPN8A6NHC0 703 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 KCNJ18B7U540 433 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 ZNF217O75362 1048 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 ACAT1P24752 427 aaKnown RBP16.34■□□□□ 0.21
U2AF1-211ENST00000486519 USP46P62068 366 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 IL9RQ01113 521 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 WDR45BQ5MNZ6 344 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 LY6G5CQ5SRR4 150 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 C10orf76Q5T2E6 689 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 C1orf216Q8TAB5 229 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 FAM212AQ96EL1 285 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 TOE1Q96GM8 510 aaKnown RBP16.34■□□□□ 0.21
U2AF1-211ENST00000486519 PKMYT1Q99640 499 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 GPR174Q9BXC1 333 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 TRIM9Q9C026 710 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 UXTQ9UBK9 157 aaPredicted RBP16.34■□□□□ 0.21
U2AF1-211ENST00000486519 SNX11Q9Y5W9 270 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 CPQQ9Y646 472 aa16.34■□□□□ 0.21
U2AF1-211ENST00000486519 BCAT2O15382 392 aaPredicted RBP16.33■□□□□ 0.2
U2AF1-211ENST00000486519 CLDN3O15551 220 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 BRINP1O60477 761 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 TULP3O75386 442 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 NCAM1P13591 858 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 C6P13671 934 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 NTSR1P30989 418 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 MATR3P43243 847 aaKnown RBP eCLIP16.33■□□□□ 0.2
U2AF1-211ENST00000486519 CSNK1EP49674 416 aaKnown RBP16.33■□□□□ 0.2
U2AF1-211ENST00000486519 KCNH2Q12809 1159 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 TARDBPQ13148 414 aaKnown RBP eCLIP16.33■□□□□ 0.2
U2AF1-211ENST00000486519 KCNT1Q5JUK3 1230 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 DCAF12L1Q5VU92 463 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 KIAA1324Q6UXG2 1013 aaKnown RBP16.33■□□□□ 0.2
U2AF1-211ENST00000486519 USP49Q70CQ1 688 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 TMPRSS12Q86WS5 348 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 ERICH1Q86X53 443 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 THEM5Q8N1Q8 247 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 TTC9Q92623 222 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 NAF1Q96HR8 494 aaKnown RBP16.33■□□□□ 0.2
U2AF1-211ENST00000486519 CFAP97Q9P2B7 532 aa16.33■□□□□ 0.2
U2AF1-211ENST00000486519 UBR5O95071 2799 aaPredicted RBP16.32■□□□□ 0.2
U2AF1-211ENST00000486519 WASH3PC4AMC7 463 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 ADRB2P07550 413 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 MAPTP10636 758 aaKnown RBP16.32■□□□□ 0.2
U2AF1-211ENST00000486519 JUPP14923 745 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 CD6P30203 668 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 MCM7P33993 719 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 KRT2P35908 639 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 IL12RB1P42701 662 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 FOSBP53539 338 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 SMARCB1Q12824 385 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 RTP5Q14D33 572 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 KIF19Q2TAC6 998 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 C6orf118Q5T5N4 469 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 ARHGAP40Q5TG30 622 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 METTL23Q86XA0 190 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 DCP1BQ8IZD4 617 aaKnown RBP16.32■□□□□ 0.2
U2AF1-211ENST00000486519 TMEM161BQ8NDZ6 487 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 FOXJ1Q92949 421 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 WBP2Q969T9 261 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 WSB2Q9NYS7 404 aaPredicted RBP16.32■□□□□ 0.2
U2AF1-211ENST00000486519 EIF2B4Q9UI10 523 aaKnown RBP16.32■□□□□ 0.2
U2AF1-211ENST00000486519 DSEQ9UL01 958 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 KIAA1024Q9UPX6 916 aa16.32■□□□□ 0.2
U2AF1-211ENST00000486519 MYH10P35580 1976 aa16.31■□□□□ 0.2
U2AF1-211ENST00000486519 TEP1Q99973 2627 aaKnown RBP16.31■□□□□ 0.2
U2AF1-211ENST00000486519 E9PMD0 336 aa16.31■□□□□ 0.2
U2AF1-211ENST00000486519 CTDNEP1O95476 244 aa16.31■□□□□ 0.2
U2AF1-211ENST00000486519 CSRP3P50461 194 aa16.31■□□□□ 0.2
U2AF1-211ENST00000486519 DNAJC3Q13217 504 aa16.31■□□□□ 0.2
U2AF1-211ENST00000486519 PDIA5Q14554 519 aa16.31■□□□□ 0.2
U2AF1-211ENST00000486519 OSTM1Q86WC4 334 aa16.31■□□□□ 0.2
U2AF1-211ENST00000486519 SCN4BQ8IWT1 228 aa16.31■□□□□ 0.2
U2AF1-211ENST00000486519 TERB1Q8NA31 727 aa16.31■□□□□ 0.2
U2AF1-211ENST00000486519 BAP1Q92560 729 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms