RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 TMEM40Q8WWA1 233 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 GATAD2BQ8WXI9 593 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 SHC3Q92529 594 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 ZKSCAN4Q969J2 545 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 RHOVQ96L33 236 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 GDAP1L1Q96MZ0 367 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 TMEM74Q96NL1 305 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 ZSWIM1Q9BR11 485 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 AP1M1Q9BXS5 423 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 CAPS2Q9BXY5 557 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 THAP2Q9H0W7 228 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 C2orf40Q9H1Z8 148 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 ATP13A1Q9HD20 1204 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 GPRC5CQ9NQ84 441 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 A1CFQ9NQ94 594 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 HOMER3Q9NSC5 361 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 CYP39A1Q9NYL5 469 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 GGA3Q9NZ52 723 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 SMARCAL1Q9NZC9 954 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 EHD2Q9NZN4 543 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 FEZ2Q9UHY8 353 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 GTF3C4Q9UKN8 822 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 ADAMTS5Q9UNA0 930 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 STXBP5LQ9Y2K9 1186 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 COQ4Q9Y3A0 265 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 PASKQ96RG2 1323 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 K7ERI5 159 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 NOP56O00567 594 aaKnown RBP6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 ATP9AO75110 1047 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 PHF2O75151 1096 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 PPFIA4O75335 1185 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 SYF2O95926 243 aaKnown RBP6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 CYP1A2P05177 515 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 ADRB2P07550 413 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 TGFB3P10600 412 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 CTNNA2P26232 953 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 MAPK4P31152 587 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 ETV3P41162 512 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 RWDD2BP57060 319 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 PTENP60484 403 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 DLG4P78352 724 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 PPATQ06203 517 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 CALCOCO2Q13137 446 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 MESDQ14696 234 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 TMEM132BQ14DG7 1078 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 ACAD10Q6JQN1 1059 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 SEPT14Q6ZU15 432 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 SYDE1Q6ZW31 735 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 CBWD2Q8IUF1 395 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 RIOX2Q8IUF8 465 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 RELL1Q8IUW5 271 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 ARHGEF19Q8IW93 802 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 BBOF1Q8ND07 529 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 REPS2Q8NFH8 660 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 LMO3Q8TAP4 145 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 HDAC7Q8WUI4 952 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 UBLCP1Q8WVY7 318 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 CASKIN2Q8WXE0 1202 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 SAAL1Q96ER3 474 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 FMO2Q99518 471 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 SH3GL2Q99962 352 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 FAM213AQ9BRX8 229 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 SYT11Q9BT88 431 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 MSTO1Q9BUK6 570 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 NUP85Q9BW27 656 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 DDX47Q9H0S4 455 aaKnown RBP6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 CARS2Q9HA77 564 aaKnown RBP6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 MRPL47Q9HD33 250 aaKnown RBP6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 RBAKQ9NYW8 714 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 GPRC5DQ9NZD1 345 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 ARHGAP28Q9P2N2 729 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 TMEM59LQ9UK28 342 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 AJAP1Q9UKB5 411 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 PRDM4Q9UKN5 801 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 AGO2Q9UKV8 859 aaKnown RBP6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 ZNF214Q9UL59 606 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 CEP83Q9Y592 693 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 PCDHB2Q9Y5E7 798 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 CORINQ9Y5Q5 1042 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 SCINQ9Y6U3 715 aa6.25□□□□□ -1.41
ATPAF1-204ENST00000474020 LOC102724159A0A0B4J2E5 919 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 ESYT3A0FGR9 886 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 ANKRD63C9JTQ0 380 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 MYO1FO00160 1098 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 EBAG9O00559 213 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 KIAA0754O94854 1291 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 GAS8O95995 478 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 PIGRP01833 764 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 MYBL2P10244 700 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 CYP11B1P15538 503 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 NR1D1P20393 614 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 COMTP21964 271 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 ATP5DP30049 168 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 GBP2P32456 591 aaPredicted RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 FNTAP49354 379 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 CARSP49589 748 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 ALDH5A1P51649 535 aaPredicted RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 STAT5BP51692 787 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 GYS2P54840 703 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 GNGT1P63211 74 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms