RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 RIF1Q5UIP0 2472 aaKnown RBP22.24■■□□□ 1.15
SREBF1-210ENST00000471445 RTN3O95197 1032 aaPredicted RBP22.24■■□□□ 1.15
SREBF1-210ENST00000471445 SMC2O95347 1197 aa22.24■■□□□ 1.15
SREBF1-210ENST00000471445 CCDC130P13994 396 aa22.24■■□□□ 1.15
SREBF1-210ENST00000471445 SATB1Q01826 763 aa22.24■■□□□ 1.15
SREBF1-210ENST00000471445 ORC1Q13415 861 aa22.24■■□□□ 1.15
SREBF1-210ENST00000471445 SPEM1Q8N4L4 309 aa22.24■■□□□ 1.15
SREBF1-210ENST00000471445 ERCC4Q92889 916 aaPredicted RBP22.24■■□□□ 1.15
SREBF1-210ENST00000471445 SMARCE1Q969G3 411 aa22.24■■□□□ 1.15
SREBF1-210ENST00000471445 TWNKQ96RR1 684 aa22.24■■□□□ 1.15
SREBF1-210ENST00000471445 KCNK16Q96T55 309 aa22.24■■□□□ 1.15
SREBF1-210ENST00000471445 FAM126AQ9BYI3 521 aaPredicted RBP22.24■■□□□ 1.15
SREBF1-210ENST00000471445 NIF3L1Q9GZT8 377 aa22.24■■□□□ 1.15
SREBF1-210ENST00000471445 MMRN2Q9H8L6 949 aa22.24■■□□□ 1.15
SREBF1-210ENST00000471445 WNT6Q9Y6F9 365 aa22.24■■□□□ 1.15
SREBF1-210ENST00000471445 ZFHX2Q9C0A1 2572 aaPredicted RBP22.24■■□□□ 1.15
SREBF1-210ENST00000471445 TNFRSF10BO14763 440 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 CETN3O15182 167 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 PAPSS2O95340 614 aaPredicted RBP22.23■■□□□ 1.15
SREBF1-210ENST00000471445 EPB41P11171 864 aaKnown RBP22.23■■□□□ 1.15
SREBF1-210ENST00000471445 IFNAR2P48551 515 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 SLC5A3P53794 718 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 SLC7A9P82251 487 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 ZXDBP98169 803 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 IFRD2Q12894 506 aaPredicted RBP22.23■■□□□ 1.15
SREBF1-210ENST00000471445 EML3Q32P44 896 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 TMEM196Q5HYL7 178 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 KRT39Q6A163 491 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 ELOA2Q8IYF1 753 aaPredicted RBP22.23■■□□□ 1.15
SREBF1-210ENST00000471445 SYNPOQ8N3V7 929 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 CPA6Q8N4T0 437 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 SUMF1Q8NBK3 374 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 PDZD8Q8NEN9 1154 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 ZMIZ2Q8NF64 920 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 OVCA2Q8WZ82 227 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 EEF2KMTQ96G04 330 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 ECT2Q9H8V3 914 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 CYP3A43Q9HB55 503 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.23■■□□□ 1.15
SREBF1-210ENST00000471445 DUS2Q9NX74 493 aaKnown RBP22.23■■□□□ 1.15
SREBF1-210ENST00000471445 IL37Q9NZH6 218 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 VPS13AQ96RL7 3174 aa22.23■■□□□ 1.15
SREBF1-210ENST00000471445 PTPRZ1P23471 2315 aaPredicted RBP22.22■■□□□ 1.15
SREBF1-210ENST00000471445 OTOGLQ3ZCN5 2332 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 TRDMT1O14717 391 aaKnown RBP22.22■■□□□ 1.15
SREBF1-210ENST00000471445 AP1G2O75843 785 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 YWHAQP27348 245 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 MXI1P50539 228 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 PMS1P54277 932 aaKnown RBP22.22■■□□□ 1.15
SREBF1-210ENST00000471445 PPP2R5DQ14738 602 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 FSTL4Q6MZW2 842 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 SLC2A14Q8TDB8 520 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 ATP2A3Q93084 1043 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 FBXO32Q969P5 355 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 TSG101Q99816 390 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 SMOQ99835 787 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 GTPBP4Q9BZE4 634 aaKnown RBP22.22■■□□□ 1.15
SREBF1-210ENST00000471445 CSNK1G1Q9HCP0 422 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 FAM49BQ9NUQ9 324 aa22.22■■□□□ 1.15
SREBF1-210ENST00000471445 HOOK1Q9UJC3 728 aaKnown RBP22.22■■□□□ 1.15
SREBF1-210ENST00000471445 ATG2BQ96BY7 2078 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 FAM92AA1XBS5 289 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 LEFTY2O00292 366 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 SLC16A3O15427 465 aaKnown RBP22.21■■□□□ 1.15
SREBF1-210ENST00000471445 CILPO75339 1184 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 GJA4P35212 333 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 CXCL12P48061 93 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 AMPD2Q01433 879 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 KIAA1958Q8N8K9 716 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 C12orf29Q8N999 325 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 ATRIPQ8WXE1 791 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 RNF38Q9H0F5 515 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 COMMD8Q9NX08 183 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 CPQQ9Y646 472 aa22.21■■□□□ 1.15
SREBF1-210ENST00000471445 TRIM49BA6NDI0 452 aa22.2■■□□□ 1.14
SREBF1-210ENST00000471445 BEST1O76090 585 aa22.2■■□□□ 1.14
SREBF1-210ENST00000471445 FKBP3Q00688 224 aaKnown RBP22.2■■□□□ 1.14
SREBF1-210ENST00000471445 LRRC63Q05C16 580 aa22.2■■□□□ 1.14
SREBF1-210ENST00000471445 CCDC150Q8NCX0 1101 aa22.2■■□□□ 1.14
SREBF1-210ENST00000471445 FBXL13Q8NEE6 735 aa22.2■■□□□ 1.14
SREBF1-210ENST00000471445 TTC16Q8NEE8 873 aa22.2■■□□□ 1.14
SREBF1-210ENST00000471445 SCAMP5Q8TAC9 235 aa22.2■■□□□ 1.14
SREBF1-210ENST00000471445 WHAMMQ8TF30 809 aa22.2■■□□□ 1.14
SREBF1-210ENST00000471445 SEMA4DQ92854 862 aa22.2■■□□□ 1.14
SREBF1-210ENST00000471445 FAXDC2Q96IV6 333 aa22.2■■□□□ 1.14
SREBF1-210ENST00000471445 NT5C1AQ9BXI3 368 aa22.2■■□□□ 1.14
SREBF1-210ENST00000471445 EPC1Q9H2F5 836 aa22.2■■□□□ 1.14
SREBF1-210ENST00000471445 K7ESF4 209 aa22.19■■□□□ 1.14
SREBF1-210ENST00000471445 STX10O60499 249 aa22.19■■□□□ 1.14
SREBF1-210ENST00000471445 ABL1P00519 1130 aa22.19■■□□□ 1.14
SREBF1-210ENST00000471445 ZDHHC11BP0C7U3 371 aa22.19■■□□□ 1.14
SREBF1-210ENST00000471445 TRIM21P19474 475 aaKnown RBP22.19■■□□□ 1.14
SREBF1-210ENST00000471445 TUBP50607 506 aa22.19■■□□□ 1.14
SREBF1-210ENST00000471445 GRSF1Q12849 480 aaKnown RBP eCLIP22.19■■□□□ 1.14
SREBF1-210ENST00000471445 SNX30Q5VWJ9 437 aa22.19■■□□□ 1.14
SREBF1-210ENST00000471445 NAIF1Q69YI7 327 aaPredicted RBP22.19■■□□□ 1.14
SREBF1-210ENST00000471445 ANKRD40Q6AI12 368 aa22.19■■□□□ 1.14
SREBF1-210ENST00000471445 HNRNPABQ99729 332 aaKnown RBP22.19■■□□□ 1.14
SREBF1-210ENST00000471445 MAN1B1Q9UKM7 699 aa22.19■■□□□ 1.14
SREBF1-210ENST00000471445 CIZ1Q9ULV3 898 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms