RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 SHC3Q92529 594 aa24.64■■□□□ 1.54
SUMO3-205ENST00000466861 C1QTNF1Q9BXJ1 281 aa24.64■■□□□ 1.54
SUMO3-205ENST00000466861 VPS16Q9H269 839 aa24.64■■□□□ 1.54
SUMO3-205ENST00000466861 SLC2A4RGQ9NR83 387 aa24.64■■□□□ 1.54
SUMO3-205ENST00000466861 LGALS16A8MUM7 142 aa24.63■■□□□ 1.53
SUMO3-205ENST00000466861 BECN2A8MW95 431 aa24.63■■□□□ 1.53
SUMO3-205ENST00000466861 HHLA1C9JL84 531 aa24.63■■□□□ 1.53
SUMO3-205ENST00000466861 RNF225M0QZC1 329 aaPredicted RBP24.63■■□□□ 1.53
SUMO3-205ENST00000466861 ZNF268Q14587 947 aaPredicted RBP24.63■■□□□ 1.53
SUMO3-205ENST00000466861 TANGO2Q6ICL3 276 aa24.63■■□□□ 1.53
SUMO3-205ENST00000466861 DPY19L2P1Q6NXN4 242 aa24.63■■□□□ 1.53
SUMO3-205ENST00000466861 ARID3BQ8IVW6 561 aaPredicted RBP24.63■■□□□ 1.53
SUMO3-205ENST00000466861 CMTM8Q8IZV2 173 aa24.63■■□□□ 1.53
SUMO3-205ENST00000466861 RSAD2Q8WXG1 361 aa24.63■■□□□ 1.53
SUMO3-205ENST00000466861 SLC46A2Q9BY10 475 aa24.63■■□□□ 1.53
SUMO3-205ENST00000466861 KIF9Q9HAQ2 790 aa24.63■■□□□ 1.53
SUMO3-205ENST00000466861 TSPAN16Q9UKR8 245 aa24.63■■□□□ 1.53
SUMO3-205ENST00000466861 TECTAO75443 2155 aa24.63■■□□□ 1.53
SUMO3-205ENST00000466861 MUC3AQ02505 3323 aa24.62■■□□□ 1.53
SUMO3-205ENST00000466861 ZNF840PA6NDX5 716 aa24.62■■□□□ 1.53
SUMO3-205ENST00000466861 SETSIPP0DME0 302 aa24.62■■□□□ 1.53
SUMO3-205ENST00000466861 BST2Q10589 180 aaKnown RBP24.62■■□□□ 1.53
SUMO3-205ENST00000466861 TAF10Q12962 218 aa24.62■■□□□ 1.53
SUMO3-205ENST00000466861 STXBP5Q5T5C0 1151 aa24.62■■□□□ 1.53
SUMO3-205ENST00000466861 MFSD6LQ8IWD5 586 aa24.62■■□□□ 1.53
SUMO3-205ENST00000466861 FBXO32Q969P5 355 aa24.62■■□□□ 1.53
SUMO3-205ENST00000466861 EPHX3Q9H6B9 360 aa24.62■■□□□ 1.53
SUMO3-205ENST00000466861 DNAJC12Q9UKB3 198 aa24.62■■□□□ 1.53
SUMO3-205ENST00000466861 SCML2Q9UQR0 700 aa24.62■■□□□ 1.53
SUMO3-205ENST00000466861 XPO1O14980 1071 aaKnown RBP24.61■■□□□ 1.53
SUMO3-205ENST00000466861 KRT5P13647 590 aa24.61■■□□□ 1.53
SUMO3-205ENST00000466861 AVPR1AP37288 418 aa24.61■■□□□ 1.53
SUMO3-205ENST00000466861 TUBP50607 506 aa24.61■■□□□ 1.53
SUMO3-205ENST00000466861 TPM4P67936 248 aa24.61■■□□□ 1.53
SUMO3-205ENST00000466861 PFKPQ01813 784 aa24.61■■□□□ 1.53
SUMO3-205ENST00000466861 GOLGA7BQ2TAP0 167 aa24.61■■□□□ 1.53
SUMO3-205ENST00000466861 PKDCCQ504Y2 493 aa24.61■■□□□ 1.53
SUMO3-205ENST00000466861 KLHDC7AQ5VTJ3 777 aa24.61■■□□□ 1.53
SUMO3-205ENST00000466861 TRIM67Q6ZTA4 783 aa24.61■■□□□ 1.53
SUMO3-205ENST00000466861 APTXQ7Z2E3 356 aaKnown RBP24.61■■□□□ 1.53
SUMO3-205ENST00000466861 CELF5Q8N6W0 485 aaKnown RBP24.61■■□□□ 1.53
SUMO3-205ENST00000466861 WNT16Q9UBV4 365 aa24.61■■□□□ 1.53
SUMO3-205ENST00000466861 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.61■■□□□ 1.53
SUMO3-205ENST00000466861 USP3Q9Y6I4 520 aa24.61■■□□□ 1.53
SUMO3-205ENST00000466861 TRAV19A0A0A6YYK7 116 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 MED7O43513 233 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 GPR37L1O60883 481 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 USP17L7P0C7H9 530 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 ZDHHC11BP0C7U3 371 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 TCF3P15923 654 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 PSMC3P17980 439 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 KIF11P52732 1056 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 RAB41Q5JT25 222 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 TXNDC8Q6A555 127 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 GJB7Q6PEY0 223 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 BMP8AQ7Z5Y6 402 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 TTC30AQ86WT1 665 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 KIAA1958Q8N8K9 716 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 MAB21L3Q8N8X9 362 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 SCAMP5Q8TAC9 235 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 TFAP2BQ92481 460 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 ERGIC2Q96RQ1 377 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 KXD1Q9BQD3 176 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 RPP25Q9BUL9 199 aaKnown RBP24.6■■□□□ 1.53
SUMO3-205ENST00000466861 TRPV5Q9NQA5 729 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 TDP1Q9NUW8 608 aa24.6■■□□□ 1.53
SUMO3-205ENST00000466861 DPYSL4O14531 572 aa24.59■■□□□ 1.53
SUMO3-205ENST00000466861 OLFM2O95897 454 aa24.59■■□□□ 1.53
SUMO3-205ENST00000466861 UCHL3P15374 230 aa24.59■■□□□ 1.53
SUMO3-205ENST00000466861 PLA2G4AP47712 749 aa24.59■■□□□ 1.53
SUMO3-205ENST00000466861 PSEN1P49768 467 aa24.59■■□□□ 1.53
SUMO3-205ENST00000466861 BPIFB4P59827 614 aa24.59■■□□□ 1.53
SUMO3-205ENST00000466861 ARHGAP44Q17R89 818 aa24.59■■□□□ 1.53
SUMO3-205ENST00000466861 CCDC186Q7Z3E2 898 aa24.59■■□□□ 1.53
SUMO3-205ENST00000466861 TRMT61BQ9BVS5 477 aaKnown RBP24.59■■□□□ 1.53
SUMO3-205ENST00000466861 LSM14BQ9BX40 385 aaKnown RBP24.59■■□□□ 1.53
SUMO3-205ENST00000466861 NAA15Q9BXJ9 866 aaKnown RBP24.59■■□□□ 1.53
SUMO3-205ENST00000466861 TLR8Q9NR97 1041 aaKnown RBP24.59■■□□□ 1.53
SUMO3-205ENST00000466861 HEPACAM2A8MVW5 462 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 OAS1P00973 400 aaKnown RBP24.58■■□□□ 1.53
SUMO3-205ENST00000466861 PTK2Q05397 1052 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 PDE4CQ08493 712 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 FCHO2Q0JRZ9 810 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 VITQ6UXI7 678 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 PIGZQ86VD9 579 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 FAM71AQ8IYT1 594 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 SCML4Q8N228 414 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 ZNF276Q8N554 614 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 KCTD13Q8WZ19 329 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 DNASE1L2Q92874 299 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 STK33Q9BYT3 514 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 CBX8Q9HC52 389 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 SIK3Q9Y2K2 1263 aa24.58■■□□□ 1.53
SUMO3-205ENST00000466861 MYO16Q9Y6X6 1858 aa24.58■■□□□ 1.52
SUMO3-205ENST00000466861 HELZP42694 1942 aaKnown RBP24.57■■□□□ 1.52
SUMO3-205ENST00000466861 ATP1A3P13637 1013 aa24.57■■□□□ 1.52
SUMO3-205ENST00000466861 HDCP19113 662 aa24.57■■□□□ 1.52
SUMO3-205ENST00000466861 BRD2P25440 801 aaKnown RBP24.57■■□□□ 1.52
SUMO3-205ENST00000466861 GNA15P30679 374 aa24.57■■□□□ 1.52
SUMO3-205ENST00000466861 VIPR2P41587 438 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms