RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SH3RF2Q8TEC5 729 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 TWNKQ96RR1 684 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 CYP2S1Q96SQ9 504 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 FAM83CQ9BQN1 747 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 GTPBP4Q9BZE4 634 aaKnown RBP10.8□□□□□ -0.68
SF3A3-204ENST00000462258 LMAN1LQ9HAT1 526 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 GKN1Q9NS71 199 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 RBM12Q9NTZ6 932 aaKnown RBP10.8□□□□□ -0.68
SF3A3-204ENST00000462258 FAM49BQ9NUQ9 324 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 ARHGAP26Q9UNA1 814 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 ZNF840PA6NDX5 716 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 PSMA7O14818 248 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 STX10O60499 249 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 GADD45BO75293 160 aaPredicted RBP10.79□□□□□ -0.68
SF3A3-204ENST00000462258 OLFM2O95897 454 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 ARSAP15289 507 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 TCF3P15923 654 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 HDCP19113 662 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 CD58P19256 250 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 YWHAQP27348 245 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 PPP3CCP48454 512 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 IFNAR2P48551 515 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 CCR3P51677 355 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 TAF10Q12962 218 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 WDR44Q5JSH3 913 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 TSSK4Q6SA08 328 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 Q6ZS52 159 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 PAQR9Q6ZVX9 377 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 ELOA2Q8IYF1 753 aaPredicted RBP10.79□□□□□ -0.68
SF3A3-204ENST00000462258 CPA6Q8N4T0 437 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 C12orf29Q8N999 325 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 FBXL13Q8NEE6 735 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 PDZD8Q8NEN9 1154 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 OSCP1Q8WVF1 389 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 FBXO32Q969P5 355 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 KCNK16Q96T55 309 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 CYP3A43Q9HB55 503 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 DUS2Q9NX74 493 aaKnown RBP10.79□□□□□ -0.68
SF3A3-204ENST00000462258 MAN1B1Q9UKM7 699 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 WNT6Q9Y6F9 365 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 FAM186AA6NE01 2351 aa10.79□□□□□ -0.68
SF3A3-204ENST00000462258 CFAP54Q96N23 3096 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 OTOL1A6NHN0 477 aaPredicted RBP10.78□□□□□ -0.68
SF3A3-204ENST00000462258 TNFRSF10BO14763 440 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 CILPO75339 1184 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 ABL1P00519 1130 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 OAS1P00973 400 aaKnown RBP10.78□□□□□ -0.68
SF3A3-204ENST00000462258 FAM200BP0CF97 657 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 ADORA2BP29275 332 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 PPP1R2P41236 205 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 MAP3K7CLP57077 242 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 MCCD1P59942 119 aaPredicted RBP10.78□□□□□ -0.68
SF3A3-204ENST00000462258 SLC7A9P82251 487 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 FKBP3Q00688 224 aaKnown RBP10.78□□□□□ -0.68
SF3A3-204ENST00000462258 CCINQ13939 588 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 GAS6Q14393 721 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 PPP2R5DQ14738 602 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 CBWD6Q4V339 395 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 CBWD3Q5JTY5 395 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 DGKKQ5KSL6 1271 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 CBWD5Q5RIA9 395 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 ANKRD40Q6AI12 368 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 ISM2Q6H9L7 571 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 CRYBG2Q8N1P7 616 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 ZMIZ2Q8NF64 920 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 OVCA2Q8WZ82 227 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 SEMA4DQ92854 862 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 ATP2A3Q93084 1043 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 CHFRQ96EP1 664 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 SMOQ99835 787 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 NT5C1AQ9BXI3 368 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 DNAI2Q9GZS0 605 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 SEMA4AQ9H3S1 761 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 RAB20Q9NX57 234 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 PCDHGA2Q9Y5H1 932 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 CPQQ9Y646 472 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 GVINP1Q7Z2Y8 2422 aa10.78□□□□□ -0.68
SF3A3-204ENST00000462258 RIF1Q5UIP0 2472 aaKnown RBP10.77□□□□□ -0.69
SF3A3-204ENST00000462258 LEFTY2O00292 366 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 BEST1O76090 585 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 NFATC1O95644 943 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 LMNAP02545 664 aaKnown RBP10.77□□□□□ -0.69
SF3A3-204ENST00000462258 MBL2P11226 248 aaPredicted RBP10.77□□□□□ -0.69
SF3A3-204ENST00000462258 TDGF1P13385 188 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
SF3A3-204ENST00000462258 ZXDBP98169 803 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 AMPD2Q01433 879 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 SATB1Q01826 763 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 EML3Q32P44 896 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 KLHL10Q6JEL2 608 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 CLEC20AQ6ZU45 233 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 ZBTB44Q8NCP5 570 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 SCAMP5Q8TAC9 235 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 SLC35C1Q96A29 364 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 JAKMIP2Q96AA8 810 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 DHTKD1Q96HY7 919 aaPredicted RBP10.77□□□□□ -0.69
SF3A3-204ENST00000462258 FAXDC2Q96IV6 333 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 ARID3AQ99856 593 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 ECT2Q9H8V3 914 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 CSNK1G1Q9HCP0 422 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms