RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 DGKKQ5KSL6 1271 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 TSSK4Q6SA08 328 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 NUP93Q8N1F7 819 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 CRYBG2Q8N1P7 616 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 TTC16Q8NEE8 873 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 NELL1Q92832 810 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 SLITRK1Q96PX8 696 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 NIF3L1Q9GZT8 377 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 PCDHGA2Q9Y5H1 932 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 OTOGLQ3ZCN5 2332 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 CETN3O15182 167 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 AP1G2O75843 785 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 RTN3O95197 1032 aaPredicted RBP20.08■□□□□ 0.81
COL5A1-203ENST00000460264 OLFM2O95897 454 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 LMNAP02545 664 aaKnown RBP20.08■□□□□ 0.81
COL5A1-203ENST00000460264 TDGF1P13385 188 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 PMS1P54277 932 aaKnown RBP20.08■□□□□ 0.81
COL5A1-203ENST00000460264 KRT39Q6A163 491 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 Q6ZS52 159 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 ZC3H3Q8IXZ2 948 aaKnown RBP20.08■□□□□ 0.81
COL5A1-203ENST00000460264 ADSSL1Q8N142 457 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 OSCP1Q8WVF1 389 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 GTPBP4Q9BZE4 634 aaKnown RBP20.08■□□□□ 0.81
COL5A1-203ENST00000460264 CYP3A43Q9HB55 503 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 FAM49BQ9NUQ9 324 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 ZSCAN32Q9NX65 697 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 DUS2Q9NX74 493 aaKnown RBP20.08■□□□□ 0.81
COL5A1-203ENST00000460264 WNT6Q9Y6F9 365 aa20.08■□□□□ 0.81
COL5A1-203ENST00000460264 EP300Q09472 2414 aaPredicted RBP20.08■□□□□ 0.8
COL5A1-203ENST00000460264 KIAA1549LQ6ZVL6 1849 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 TNFRSF10BO14763 440 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 SLC16A3O15427 465 aaKnown RBP20.07■□□□□ 0.8
COL5A1-203ENST00000460264 KINO60870 393 aaKnown RBP20.07■□□□□ 0.8
COL5A1-203ENST00000460264 OAS1P00973 400 aaKnown RBP20.07■□□□□ 0.8
COL5A1-203ENST00000460264 YWHAQP27348 245 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 MXI1P50539 228 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 CCR3P51677 355 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 SLC5A3P53794 718 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 ZXDBP98169 803 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 ANKRD40Q6AI12 368 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 ELOA2Q8IYF1 753 aaPredicted RBP20.07■□□□□ 0.8
COL5A1-203ENST00000460264 SPEM1Q8N4L4 309 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 CPA6Q8N4T0 437 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 C12orf29Q8N999 325 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 ZBTB44Q8NCP5 570 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 ZMIZ2Q8NF64 920 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 SCAMP5Q8TAC9 235 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 SLC2A14Q8TDB8 520 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 ATP2A3Q93084 1043 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 FBXO32Q969P5 355 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 TWNKQ96RR1 684 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 TSG101Q99816 390 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 RNF38Q9H0F5 515 aa20.07■□□□□ 0.8
COL5A1-203ENST00000460264 ABL1P00519 1130 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 IFNAR2P48551 515 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 SLC7A9P82251 487 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 FKBP3Q00688 224 aaKnown RBP20.06■□□□□ 0.8
COL5A1-203ENST00000460264 SATB1Q01826 763 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 LRRC63Q05C16 580 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 PPP2R5DQ14738 602 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 EML3Q32P44 896 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 TMEM196Q5HYL7 178 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 CCDC150Q8NCX0 1101 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 PDZD8Q8NEN9 1154 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 OVCA2Q8WZ82 227 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 SEMA4DQ92854 862 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 SMOQ99835 787 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 FAM126AQ9BYI3 521 aaPredicted RBP20.06■□□□□ 0.8
COL5A1-203ENST00000460264 ECT2Q9H8V3 914 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 CSNK1G1Q9HCP0 422 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 IL37Q9NZH6 218 aa20.06■□□□□ 0.8
COL5A1-203ENST00000460264 CIZ1Q9ULV3 898 aaPredicted RBP20.06■□□□□ 0.8
COL5A1-203ENST00000460264 TRIM49BA6NDI0 452 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 LEFTY2O00292 366 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 TRDMT1O14717 391 aaKnown RBP20.05■□□□□ 0.8
COL5A1-203ENST00000460264 STX10O60499 249 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 CILPO75339 1184 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 BEST1O76090 585 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 CD58P19256 250 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 TRIM21P19474 475 aaKnown RBP20.05■□□□□ 0.8
COL5A1-203ENST00000460264 FSTL4Q6MZW2 842 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 SYNPOQ8N3V7 929 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 FBXL13Q8NEE6 735 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 WHAMMQ8TF30 809 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 ATRIPQ8WXE1 791 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 NT5C1AQ9BXI3 368 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 MAN1B1Q9UKM7 699 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 CPQQ9Y646 472 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 ATG2BQ96BY7 2078 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 GPR179Q6PRD1 2367 aa20.05■□□□□ 0.8
COL5A1-203ENST00000460264 SPTBN4Q9H254 2564 aa20.04■□□□□ 0.8
COL5A1-203ENST00000460264 FAM92AA1XBS5 289 aa20.04■□□□□ 0.8
COL5A1-203ENST00000460264 LILRB5O75023 590 aa20.04■□□□□ 0.8
COL5A1-203ENST00000460264 GADD45BO75293 160 aaPredicted RBP20.04■□□□□ 0.8
COL5A1-203ENST00000460264 FAM200BP0CF97 657 aa20.04■□□□□ 0.8
COL5A1-203ENST00000460264 ADORA2BP29275 332 aa20.04■□□□□ 0.8
COL5A1-203ENST00000460264 GJA4P35212 333 aa20.04■□□□□ 0.8
COL5A1-203ENST00000460264 CXCL12P48061 93 aa20.04■□□□□ 0.8
COL5A1-203ENST00000460264 AMPD2Q01433 879 aa20.04■□□□□ 0.8
COL5A1-203ENST00000460264 DCAF17Q5H9S7 520 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms