RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 FBXO32Q969P5 355 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 KXD1Q9BQD3 176 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 RPP25Q9BUL9 199 aaKnown RBP12.49□□□□□ -0.41
HSPG2-206ENST00000439717 C1QTNF1Q9BXJ1 281 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 EPHX3Q9H6B9 360 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 SIX2Q9NPC8 291 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 PLCB1Q9NQ66 1216 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 SLC2A4RGQ9NR83 387 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 DNAJC12Q9UKB3 198 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 TSPAN16Q9UKR8 245 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 NCOR1O75376 2440 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 TRAV19A0A0A6YYK7 116 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 LGALS16A8MUM7 142 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 USP17L7P0C7H9 530 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 SETSIPP0DME0 302 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 AVPR1AP37288 418 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 TPM4P67936 248 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 APBA1Q02410 837 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 BST2Q10589 180 aaKnown RBP12.48□□□□□ -0.41
HSPG2-206ENST00000439717 IFRD2Q12894 506 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-206ENST00000439717 ZNF268Q14587 947 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-206ENST00000439717 IQCB1Q15051 598 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 MEA1Q16626 185 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 ARHGAP44Q17R89 818 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 KLHDC7AQ5VTJ3 777 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 SNX30Q5VWJ9 437 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 TXNDC8Q6A555 127 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 DPY19L2P1Q6NXN4 242 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 TRIM67Q6ZTA4 783 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 TTC30AQ86WT1 665 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 MFSD6LQ8IWD5 586 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 CELF5Q8N6W0 485 aaKnown RBP12.48□□□□□ -0.41
HSPG2-206ENST00000439717 SCAMP5Q8TAC9 235 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 SHC3Q92529 594 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 LSM14BQ9BX40 385 aaKnown RBP12.48□□□□□ -0.41
HSPG2-206ENST00000439717 PLA2G2FQ9BZM2 168 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 KIF9Q9HAQ2 790 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.48□□□□□ -0.41
HSPG2-206ENST00000439717 SCML2Q9UQR0 700 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 DAAM1Q9Y4D1 1078 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 GREB1Q4ZG55 1949 aa12.48□□□□□ -0.41
HSPG2-206ENST00000439717 HEPACAM2A8MVW5 462 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 DPYSL4O14531 572 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 XPO1O14980 1071 aaKnown RBP12.47□□□□□ -0.41
HSPG2-206ENST00000439717 MED7O43513 233 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 NARSO43776 548 aaKnown RBP12.47□□□□□ -0.41
HSPG2-206ENST00000439717 GPR37L1O60883 481 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 ZDHHC11BP0C7U3 371 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 ATP1A3P13637 1013 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 PSMC3P17980 439 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 HDCP19113 662 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 VIPR2P41587 438 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 TUBP50607 506 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 KIF11P52732 1056 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 PFKPQ01813 784 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 PKDCCQ504Y2 493 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 VITQ6UXI7 678 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 APTXQ7Z2E3 356 aaKnown RBP12.47□□□□□ -0.41
HSPG2-206ENST00000439717 PIGZQ86VD9 579 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 ST13P5Q8NFI4 369 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-206ENST00000439717 TFAP2BQ92481 460 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 TRMT61BQ9BVS5 477 aaKnown RBP12.47□□□□□ -0.41
HSPG2-206ENST00000439717 NAA15Q9BXJ9 866 aaKnown RBP12.47□□□□□ -0.41
HSPG2-206ENST00000439717 SMOC2Q9H3U7 446 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 TRPC7Q9HCX4 862 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 TLR8Q9NR97 1041 aaKnown RBP12.47□□□□□ -0.41
HSPG2-206ENST00000439717 TDP1Q9NUW8 608 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 WNT16Q9UBV4 365 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 USP3Q9Y6I4 520 aa12.47□□□□□ -0.41
HSPG2-206ENST00000439717 TMEM221A6NGB7 291 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 M0R296 226 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 PRAMEF12O95522 483 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 OLFM2O95897 454 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 OAS1P00973 400 aaKnown RBP12.46□□□□□ -0.41
HSPG2-206ENST00000439717 CKMP06732 381 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 UCHL3P15374 230 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 BRD2P25440 801 aaKnown RBP12.46□□□□□ -0.41
HSPG2-206ENST00000439717 GNA15P30679 374 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 USP8P40818 1118 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 PLA2G4AP47712 749 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 PSEN1P49768 467 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 GPC5P78333 572 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 UBXN1Q04323 297 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 PDE4CQ08493 712 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 FCHO2Q0JRZ9 810 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 FILIP1LQ4L180 1135 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 RAB41Q5JT25 222 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 GPRIN1Q7Z2K8 1008 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 CCDC186Q7Z3E2 898 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 YAF2Q8IY57 180 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 FAM71AQ8IYT1 594 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 UBA3Q8TBC4 463 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 BPIFB1Q8TDL5 484 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 KCTD13Q8WZ19 329 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 USP13Q92995 863 aaPredicted RBP12.46□□□□□ -0.41
HSPG2-206ENST00000439717 ASIC4Q96FT7 647 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 ERGIC2Q96RQ1 377 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 ZSWIM1Q9BR11 485 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 STK33Q9BYT3 514 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 CBX8Q9HC52 389 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms