RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 HSF2BPO75031 334 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 HEXIM1O94992 359 aaKnown RBP7.61□□□□□ -1.19
LSM8-204ENST00000424702 CALCAP01258 141 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 CLCNKBP51801 687 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 CDR1P51861 262 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 CLDN10P78369 228 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 NR1H3Q13133 447 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 C2CD6Q53TS8 623 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 VARS2Q5ST30 1063 aaKnown RBP7.61□□□□□ -1.19
LSM8-204ENST00000424702 CHRDL2Q6WN34 429 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 ZNF557Q8N988 423 aaPredicted RBP7.61□□□□□ -1.19
LSM8-204ENST00000424702 UBA3Q8TBC4 463 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 GRK7Q8WTQ7 553 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 MCEEQ96PE7 176 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 PCDHB18PQ96TA0 734 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 CARD9Q9H257 536 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 VRTNQ9H8Y1 702 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 SH3BP1Q9Y3L3 701 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 PTPRJQ12913 1337 aa7.61□□□□□ -1.19
LSM8-204ENST00000424702 LRRD1A4D1F6 860 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 TRIM43BA6NCK2 446 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 F9P00740 461 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 EDN1P05305 212 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 YWHAQP27348 245 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 MAN1A1P33908 653 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 PIGHQ14442 188 aaPredicted RBP7.6□□□□□ -1.19
LSM8-204ENST00000424702 LLGL1Q15334 1064 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 CNGA2Q16280 664 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 AAK1Q2M2I8 961 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 KAZNQ674X7 775 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 TRIM43Q96BQ3 446 aaPredicted RBP7.6□□□□□ -1.19
LSM8-204ENST00000424702 RBM41Q96IZ5 413 aaKnown RBP7.6□□□□□ -1.19
LSM8-204ENST00000424702 DCLK3Q9C098 648 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 NKX2-4Q9H2Z4 354 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 ABCB6Q9NP58 842 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 CYLDQ9NQC7 956 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 RNF19AQ9NV58 838 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 ASIC3Q9UHC3 531 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 BACE2Q9Y5Z0 518 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 TMEM265A0A087WTH1 108 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 PPP3CCP48454 512 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 RGS7P49802 495 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.6□□□□□ -1.193e-6■□□□□ 11
LSM8-204ENST00000424702 PIK3R5Q8WYR1 880 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 MYLPFQ96A32 169 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 HAUS1Q96CS2 278 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 CEP295NLQ96MC4 621 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 PPP1R10Q96QC0 940 aaKnown RBP7.6□□□□□ -1.19
LSM8-204ENST00000424702 RNF39Q9H2S5 420 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 CENPHQ9H3R5 247 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 HOMER3Q9NSC5 361 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 THG1LQ9NWX6 298 aaKnown RBP7.6□□□□□ -1.19
LSM8-204ENST00000424702 SLC9A3R1O14745 358 aaPredicted RBP7.6□□□□□ -1.19
LSM8-204ENST00000424702 OR1D2P34982 312 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 NOMO3P69849 1222 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 IFFO1Q0D2I5 559 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 FBXO38Q6PIJ6 1188 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 PALB2Q86YC2 1186 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 SLC39A11Q8N1S5 342 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 ACSF2Q96CM8 615 aaPredicted RBP7.6□□□□□ -1.19
LSM8-204ENST00000424702 HINFPQ9BQA5 517 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 ZSWIM1Q9BR11 485 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 EPB41L5Q9HCM4 733 aa7.6□□□□□ -1.19
LSM8-204ENST00000424702 TIMM13Q9Y5L4 95 aaPredicted RBP7.6□□□□□ -1.19
LSM8-204ENST00000424702 H0YGN5 161 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 RRP9O43818 475 aaKnown RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 ZMYND10O75800 440 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 CYP1A2P05177 515 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 KRT7P08729 469 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 CENPCQ03188 943 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 CDO1Q16878 200 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 PREPLQ4J6C6 727 aaPredicted RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 ATAT1Q5SQI0 421 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 PRPF38BQ5VTL8 546 aaKnown RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 NT5DC3Q86UY8 548 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 KRT222Q8N1A0 295 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 BTBD6Q96KE9 485 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 GPR88Q9GZN0 384 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 EPC1Q9H2F5 836 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 TRPC7Q9HCX4 862 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 NT5C1B-RDH14C9J2C7 533 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 DGKIO75912 1065 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 MYL4P12829 197 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 LCP1P13796 627 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 NPR3P17342 541 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 CHRNB2P17787 502 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 CLCN6P51797 869 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 WNT7BP56706 349 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 SLC7A5Q01650 507 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 SKIDA1Q1XH10 827 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 EFHC2Q5JST6 749 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 ACBD5Q5T8D3 534 aaPredicted RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 BZW1Q7L1Q6 419 aaKnown RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 ZNF598Q86UK7 904 aaKnown RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 FAM35AQ86V20 835 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 PHF13Q86YI8 300 aaPredicted RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 ANKRD52Q8NB46 1076 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 NOA1Q8NC60 698 aaKnown RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 KCTD6Q8NC69 237 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 MYCBPAPQ8TBZ2 947 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms