RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 FTLP02792 175 aaPredicted RBP9.41□□□□□ -0.9
BRCC3-206ENST00000399042 CALB1P05937 261 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 CFHP08603 1231 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 CSH1P0DML2 217 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 CSH2P0DML3 217 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 DESP17661 470 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 CHRNB2P17787 502 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 YWHAQP27348 245 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 GPR15P49685 360 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 NAP1L1P55209 391 aaKnown RBP9.41□□□□□ -0.9
BRCC3-206ENST00000399042 KRT83P78385 493 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 CDK17Q00537 523 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 ADIGQ0VDE8 80 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 PDCLQ13371 301 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 MEA1Q16626 185 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 CYP4A22Q5TCH4 519 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 HGSNATQ68CP4 663 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 ACAD10Q6JQN1 1059 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 ALKBH5Q6P6C2 394 aaKnown RBP9.41□□□□□ -0.9
BRCC3-206ENST00000399042 WDR59Q6PJI9 974 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 MMS22LQ6ZRQ5 1243 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 CLEC20AQ6ZU45 233 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 DENND5BQ6ZUT9 1274 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 PAQR9Q6ZVX9 377 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 PHLDB2Q86SQ0 1253 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 PIGZQ86VD9 579 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 TTC30AQ86WT1 665 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 NUP93Q8N1F7 819 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 TTC9BQ8N6N2 239 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 MYLIPQ8WY64 445 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 DDX1Q92499 740 aaKnown RBP9.41□□□□□ -0.9
BRCC3-206ENST00000399042 TRIM11Q96F44 468 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 HSFY1Q96LI6 401 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 CDX2Q99626 313 aaPredicted RBP9.41□□□□□ -0.9
BRCC3-206ENST00000399042 PKMYT1Q99640 499 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 SMOQ99835 787 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 ZSWIM1Q9BR11 485 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 C11orf70Q9BRQ4 267 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 APOL5Q9BWW9 433 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 NACA2Q9H009 215 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 FBXO44Q9H4M3 255 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 SPTLC3Q9NUV7 552 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 HSFX1Q9UBD0 423 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 FBXW11Q9UKB1 542 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 STRIP2Q9ULQ0 834 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 INSL5Q9Y5Q6 135 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 MTCH2Q9Y6C9 303 aa9.41□□□□□ -0.9
BRCC3-206ENST00000399042 EPN1Q9Y6I3 576 aaPredicted RBP9.41□□□□□ -0.9
BRCC3-206ENST00000399042 A0A087X0T9 212 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 CCDC195A0A1B0GUA6 201 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 SLC38A8A6NNN8 435 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 GOLGA8SH3BPF8 625 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 CAPN9O14815 690 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 ARHGAP6O43182 974 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 SART1O43290 800 aaKnown RBP9.4□□□□□ -0.9
BRCC3-206ENST00000399042 RTN2O75298 545 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 RFPL2O75678 378 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 ZMYND10O75800 440 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 BEST1O76090 585 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 FBXO21O94952 628 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 C1RP00736 705 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 H2AFZP0C0S5 128 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 USP17L7P0C7H9 530 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 FAM228BP0C875 321 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 MYL4P12829 197 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 ABCB4P21439 1286 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 GTF2F1P35269 517 aaKnown RBP eCLIP9.4□□□□□ -0.9
BRCC3-206ENST00000399042 GPD2P43304 727 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 MAGEA1P43355 309 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 PLA2G4AP47712 749 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 TKTL1P51854 596 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 SLC5A3P53794 718 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 CACNA2D1P54289 1103 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 RNASE9P60153 205 aaKnown RBP9.4□□□□□ -0.9
BRCC3-206ENST00000399042 HYAL1Q12794 435 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 SLC18A3Q16572 532 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 RARS2Q5T160 578 aaKnown RBP9.4□□□□□ -0.9
BRCC3-206ENST00000399042 CES5AQ6NT32 575 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 PMF1Q6P1K2 205 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 LILRA6Q6PI73 481 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 TMC5Q6UXY8 1006 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 H2AFVQ71UI9 128 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 RTL10Q7L3V2 364 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 SCUBE3Q8IX30 993 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 EFHBQ8N7U6 833 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 C12orf76Q8N812 135 aaPredicted RBP9.4□□□□□ -0.9
BRCC3-206ENST00000399042 STK32AQ8WU08 396 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 SLC22A17Q8WUG5 538 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 HDAC7Q8WUI4 952 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 CTNNBL1Q8WYA6 563 aaPredicted RBP9.4□□□□□ -0.9
BRCC3-206ENST00000399042 SMG7Q92540 1137 aaKnown RBP9.4□□□□□ -0.9
BRCC3-206ENST00000399042 FBXO32Q969P5 355 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 FAM149B1Q96BN6 582 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 ZNF653Q96CK0 615 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 C18orf8Q96DM3 657 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 SPATA17Q96L03 361 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 ZNF830Q96NB3 372 aaPredicted RBP9.4□□□□□ -0.9
BRCC3-206ENST00000399042 SLITRK1Q96PX8 696 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 PCDHB18PQ96TA0 734 aa9.4□□□□□ -0.9
BRCC3-206ENST00000399042 CORO1BQ9BR76 489 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms