RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 DRG2P55039 364 aaKnown RBP17.81■□□□□ 0.44
SIN3A-203ENST00000394949 FOXD4Q12950 439 aaPredicted RBP17.81■□□□□ 0.44
SIN3A-203ENST00000394949 CLEC16AQ2KHT3 1053 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 TTC23LQ6PF05 361 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 MAGEC3Q8TD91 643 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 NFIBO00712 420 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 GSTA3Q16772 222 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 AGAP9Q5VTM2 703 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 KATNAL1Q9BW62 490 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 NDFIP2Q9NV92 336 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 THAP1Q9NVV9 213 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 SIK3Q9Y2K2 1263 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 C2CD2Q9Y426 696 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 RPS6KL1Q9Y6S9 549 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 ZC3H13Q5T200 1668 aaKnown RBP17.81■□□□□ 0.44
SIN3A-203ENST00000394949 MOCS2O96007 188 aaPredicted RBP17.81■□□□□ 0.44
SIN3A-203ENST00000394949 DRD4P21917 467 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 RPS12P25398 132 aaKnown RBP17.81■□□□□ 0.44
SIN3A-203ENST00000394949 SKIV2L2P42285 1042 aaKnown RBP17.81■□□□□ 0.44
SIN3A-203ENST00000394949 ITPK1Q13572 414 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 TRAF7Q6Q0C0 670 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 TAS2R42Q7RTR8 314 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 TCP10LQ8TDR4 215 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 TMEM143Q96AN5 459 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 KLHL25Q9H0H3 589 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 NRDE2Q9H7Z3 1164 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 SORCS3Q9UPU3 1222 aa17.81■□□□□ 0.44
SIN3A-203ENST00000394949 SNAPC2Q13487 334 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 DCTN2Q13561 401 aaKnown RBP17.8■□□□□ 0.44
SIN3A-203ENST00000394949 TAF1CQ15572 869 aaPredicted RBP17.8■□□□□ 0.44
SIN3A-203ENST00000394949 CCDC103Q8IW40 242 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 HOMEZQ8IX15 550 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 FAM205AQ6ZU69 1335 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 CPA3P15088 417 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 GARTP22102 1010 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 DEPDC1Q5TB30 811 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 SMIM5Q71RC9 77 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 ASIC4Q96FT7 647 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 RMND5BQ96G75 393 aaPredicted RBP17.8■□□□□ 0.44
SIN3A-203ENST00000394949 SNX9Q9Y5X1 595 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 PRKCIP41743 596 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 XRCC4Q13426 336 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 PLEKHA7Q6IQ23 1121 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 DENND1BQ6P3S1 775 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 RRM2BQ7LG56 351 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 A0A087X0B3 334 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 MYO1GB0I1T2 1018 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 SERPINE1P05121 402 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 ZNF720Q7Z2F6 126 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 CHST13Q8NET6 341 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 SLC20A1Q8WUM9 679 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 RMDN1Q96DB5 314 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 GIMAP4Q9NUV9 329 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 KCNH4Q9UQ05 1017 aa17.8■□□□□ 0.44
SIN3A-203ENST00000394949 DDX3XO00571 662 aaKnown RBP eCLIP17.79■□□□□ 0.449e-7■□□□□ 10.3
SIN3A-203ENST00000394949 CLASP2O75122 1294 aaKnown RBP17.79■□□□□ 0.44
SIN3A-203ENST00000394949 CBX6O95503 412 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 DLGAP3O95886 979 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 RARAP10276 462 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 TGM2P21980 687 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 LRRC40Q9H9A6 602 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 KCNK4Q9NYG8 393 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 COL3A1P02461 1466 aaPredicted RBP17.79■□□□□ 0.44
SIN3A-203ENST00000394949 DYNC1LI2O43237 492 aaPredicted RBP17.79■□□□□ 0.44
SIN3A-203ENST00000394949 RASSF9O75901 435 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 ZNF23P17027 643 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 ATP6V1E1P36543 226 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 C1QBPQ07021 282 aaKnown RBP17.79■□□□□ 0.44
SIN3A-203ENST00000394949 CSTF3Q12996 717 aaKnown RBP17.79■□□□□ 0.44
SIN3A-203ENST00000394949 MAGED4Q96JG8 741 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 SH2D3AQ9BRG2 576 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 C17orf80Q9BSJ5 609 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 IL1RL2Q9HB29 575 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 COPG2Q9UBF2 871 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 KPNA4O00629 521 aaPredicted RBP17.79■□□□□ 0.44
SIN3A-203ENST00000394949 ZSCAN9O15535 394 aaPredicted RBP17.79■□□□□ 0.44
SIN3A-203ENST00000394949 WFS1O76024 890 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 CHRNB3Q05901 458 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 SLC16A10Q8TF71 515 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 FAM210AQ96ND0 272 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 DDX50Q9BQ39 737 aaKnown RBP17.79■□□□□ 0.44
SIN3A-203ENST00000394949 TMEM79Q9BSE2 394 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 TMEM121Q9BTD3 319 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 MMTAG2Q9BU76 263 aaKnown RBP17.79■□□□□ 0.44
SIN3A-203ENST00000394949 BRD8Q9H0E9 1235 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 A1CFQ9NQ94 594 aaKnown RBP17.79■□□□□ 0.44
SIN3A-203ENST00000394949 ZNF263O14978 683 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 TPST1O60507 370 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 NDUFS3O75489 264 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 TFE3P19532 575 aaPredicted RBP17.79■□□□□ 0.44
SIN3A-203ENST00000394949 PRKCEQ02156 737 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 CYP4A22Q5TCH4 519 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 PRCCQ92733 491 aaPredicted RBP17.79■□□□□ 0.44
SIN3A-203ENST00000394949 VCPIP1Q96JH7 1222 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 COMMD3-BMI1R4GMX3 469 aa17.79■□□□□ 0.44
SIN3A-203ENST00000394949 ANXA9O76027 345 aa17.78■□□□□ 0.44
SIN3A-203ENST00000394949 FKBP9O95302 570 aa17.78■□□□□ 0.44
SIN3A-203ENST00000394949 ATP6V1C1P21283 382 aa17.78■□□□□ 0.44
SIN3A-203ENST00000394949 SREBF1P36956 1147 aa17.78■□□□□ 0.44
SIN3A-203ENST00000394949 PRKAA2P54646 552 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms