RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 RIBC1Q8N443 379 aaPredicted RBP9.47□□□□□ -0.89
TDP1-202ENST00000393452 KBTBD7Q8WVZ9 684 aa9.47□□□□□ -0.89
TDP1-202ENST00000393452 HSPH1Q92598 858 aa9.47□□□□□ -0.89
TDP1-202ENST00000393452 CCDC77Q9BR77 488 aa9.47□□□□□ -0.89
TDP1-202ENST00000393452 TRIM6Q9C030 488 aaPredicted RBP9.47□□□□□ -0.89
TDP1-202ENST00000393452 RAB6CQ9H0N0 254 aa9.47□□□□□ -0.89
TDP1-202ENST00000393452 SAYSD1Q9NPB0 183 aa9.47□□□□□ -0.89
TDP1-202ENST00000393452 FAM49BQ9NUQ9 324 aa9.47□□□□□ -0.89
TDP1-202ENST00000393452 DDX20Q9UHI6 824 aaKnown RBP9.47□□□□□ -0.89
TDP1-202ENST00000393452 PIN4Q9Y237 131 aaKnown RBP9.47□□□□□ -0.89
TDP1-202ENST00000393452 ACTL7BQ9Y614 415 aa9.47□□□□□ -0.89
TDP1-202ENST00000393452 A0A087WUV0 522 aaPredicted RBP9.46□□□□□ -0.89
TDP1-202ENST00000393452 SMAPO00193 183 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 PAPSS1O43252 624 aaPredicted RBP9.46□□□□□ -0.89
TDP1-202ENST00000393452 PRPSAP2O60256 369 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 AKAP5P24588 427 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 RPL22P35268 128 aaKnown RBP9.46□□□□□ -0.89
TDP1-202ENST00000393452 SCNN1AP37088 669 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 RGS7P49802 495 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 CDH6P55285 790 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 SNX16P57768 344 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 ZNF200P98182 395 aaPredicted RBP9.46□□□□□ -0.89
TDP1-202ENST00000393452 DPYSL3Q14195 570 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 FASTKD3Q14CZ7 662 aaKnown RBP9.46□□□□□ -0.89
TDP1-202ENST00000393452 PDK2Q15119 407 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 BOLA3Q53S33 107 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 C17orf99Q6UX52 265 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 ARCQ7LC44 396 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 TDRPQ86YL5 185 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 RFX6Q8HWS3 928 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 PPIL6Q8IXY8 311 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 NME8Q8N427 588 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 NAT8LQ8N9F0 302 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 TEKT4Q8WW24 435 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 CPT1BQ92523 772 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 TBCBQ99426 244 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 CALN1Q9BXU9 219 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 RRAGCQ9HB90 399 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.46□□□□□ -0.89
TDP1-202ENST00000393452 HESX1Q9UBX0 185 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 NAALADL1Q9UQQ1 740 aa9.46□□□□□ -0.89
TDP1-202ENST00000393452 TMEM120BA0PK00 339 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 MANSC4A6NHS7 340 aaPredicted RBP9.46□□□□□ -0.9
TDP1-202ENST00000393452 KPNA7A9QM74 516 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 ANKRD65E5RJM6 399 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 PIK3R2O00459 728 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 SPTLC1O15269 473 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 XPOTO43592 962 aaKnown RBP9.46□□□□□ -0.9
TDP1-202ENST00000393452 GRAP2O75791 330 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 CAPN15O75808 1086 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 RBP3P10745 1247 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 CREB1P16220 341 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 IL4RP24394 825 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 GCAP28676 217 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 STIP1P31948 543 aaKnown RBP9.46□□□□□ -0.9
TDP1-202ENST00000393452 PNPLA4P41247 253 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 MAGEA9P43362 315 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 CTCFP49711 727 aaPredicted RBP9.46□□□□□ -0.9
TDP1-202ENST00000393452 CRYBB1P53674 252 aaPredicted RBP9.46□□□□□ -0.9
TDP1-202ENST00000393452 HUNKP57058 714 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 EIF3EP60228 445 aaKnown RBP9.46□□□□□ -0.9
TDP1-202ENST00000393452 MMRN1Q13201 1228 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 TFDP2Q14188 446 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 NOMO1Q15155 1222 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 TAF1CQ15572 869 aaPredicted RBP9.46□□□□□ -0.9
TDP1-202ENST00000393452 FAM47CQ5HY64 1035 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 CYP4F22Q6NT55 531 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 CENPUQ71F23 418 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 RASAL3Q86YV0 1011 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 UNC45BQ8IWX7 931 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 CYP4X1Q8N118 509 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 ANKRD52Q8NB46 1076 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 OR6B3Q8NGW1 331 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 SPATA18Q8TC71 538 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 RSAD2Q8WXG1 361 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 MAML1Q92585 1016 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 ZNF560Q96MR9 790 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 RNF157Q96PX1 679 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 NCAPGQ9BPX3 1015 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 C11orf84Q9BUA3 381 aaPredicted RBP9.46□□□□□ -0.9
TDP1-202ENST00000393452 KATNAL1Q9BW62 490 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 RNF39Q9H2S5 420 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 DPEP3Q9H4B8 488 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 CYLDQ9NQC7 956 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 SCN10AQ9Y5Y9 1956 aa9.46□□□□□ -0.9
TDP1-202ENST00000393452 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 A8MXQ7 604 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 ZNF487B1APH4 448 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 E7ESA3 106 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 MCF2LO15068 1137 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 MDM4O15151 490 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 FGFR1P11362 822 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 SDC4P31431 198 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 PTPN9P43378 593 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 PURAQ00577 322 aaKnown RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 SOX4Q06945 474 aaPredicted RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 BST2Q10589 180 aaKnown RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 RASA2Q15283 850 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 HIF1AQ16665 826 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 GKAP1Q5VSY0 366 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms