RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 NUP93Q8N1F7 819 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 ZBTB8BQ8NAP8 495 aaPredicted RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 TFB1MQ8WVM0 346 aaKnown RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 SLC2A11Q9BYW1 496 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 GPRC5CQ9NQ84 441 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 CDH22Q9UJ99 828 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 NRXN2Q9P2S2 1712 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 CCDC195A0A1B0GUA6 201 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 CAPNS1P04632 268 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 PRKCGP05129 697 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 FDFT1P37268 417 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 STT3AP46977 705 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 UBXN2AP68543 259 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 NOMO3P69849 1222 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 SNRNP35Q16560 246 aaKnown RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 MMEL1Q495T6 779 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 TCHHL1Q5QJ38 904 aaPredicted RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 ZNF362Q5T0B9 420 aaPredicted RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 TATDN1Q6P1N9 297 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 C1orf228Q6PIY5 440 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 C15orf39Q6ZRI6 1047 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 DENND5BQ6ZUT9 1274 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 XXYLT1Q8NBI6 393 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 KCNN1Q92952 543 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 OXCT2Q9BYC2 517 aaPredicted RBP12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 PLLPQ9Y342 182 aa12.18□□□□□ -0.46
SMARCA1-201ENST00000371121 SERPINA6P08185 405 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 EEF2P13639 858 aaKnown RBP12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 RAG1P15918 1043 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 RPL22P35268 128 aaKnown RBP12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 RPL5P46777 297 aaKnown RBP12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 CD97P48960 835 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 ZNF200P98182 395 aaPredicted RBP12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 GTF2BQ00403 316 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 PTK7Q13308 1070 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 SYCP2LQ5T4T6 812 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 C15orf52Q6ZUT6 534 aaKnown RBP12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 SV2AQ7L0J3 742 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 CERS5Q8N5B7 392 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 JDP2Q8WYK2 163 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 LXNQ9BS40 222 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 PLVAPQ9BX97 442 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 SMYD3Q9H7B4 428 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 TEX264Q9Y6I9 313 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 MGAMO43451 1857 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 FER1L6Q2WGJ9 1857 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 CRTAMO95727 393 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 ITGAXP20702 1163 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 PMLP29590 882 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 ABCD1P33897 745 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 NFIAQ12857 509 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 SPOCD1Q6ZMY3 1216 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 UNC45BQ8IWX7 931 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 SEPT12Q8IYM1 358 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 KIAA0319LQ8IZA0 1049 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 FNDC8Q8TC99 324 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 HSPH1Q92598 858 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 C11orf70Q9BRQ4 267 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 KIFC3Q9BVG8 833 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 SHCBP1LQ9BZQ2 653 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 PCDH9Q9HC56 1237 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 RAB20Q9NX57 234 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 SOX13Q9UN79 622 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 USTQ9Y2C2 406 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 ADCY6O43306 1168 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 PEX1O43933 1283 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 RBP3P10745 1247 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 GABRB3P28472 473 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 NCKAP1LP55160 1127 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 GSTM4Q03013 218 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 SPOPLQ6IQ16 392 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 FRMD7Q6ZUT3 714 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 ZNF554Q86TJ5 538 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 SLC15A3Q8IY34 581 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 SLC26A7Q8TE54 656 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 CCDC127Q96BQ5 260 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 DCUN1D1Q96GG9 259 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 PPCSQ9HAB8 311 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 SERPINB13Q9UIV8 391 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 TTLL3Q9Y4R7 772 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 PCDHAC2Q9Y5I4 1007 aa12.17□□□□□ -0.46
SMARCA1-201ENST00000371121 LYPLA1O75608 230 aaPredicted RBP12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 DESP17661 470 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 PLCB3Q01970 1234 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 Q6ZNX1 250 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 ADGRF2Q8IZF7 708 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 LRRC43Q8N309 656 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 ACTRT2Q8TDY3 377 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 PYROXD1Q8WU10 500 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 VTI1AQ96AJ9 217 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 RANBP9Q96S59 729 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 ZNF696Q9H7X3 374 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 PACSIN3Q9UKS6 424 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 PROCP04070 461 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 ELK3P41970 407 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 MFSD14BQ5SR56 506 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 KLC3Q6P597 504 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 CATSPER2Q96P56 530 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 EMCNQ9ULC0 261 aa12.16□□□□□ -0.46
SMARCA1-201ENST00000371121 LRRC37AA6NMS7 1700 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms