RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 CREMQ03060 361 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 SMC1AQ14683 1233 aaKnown RBP11.54□□□□□ -0.56
BRCC3-204ENST00000369462 SDHAF4Q5VUM1 108 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 TPGS2Q68CL5 300 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 SLC35G2Q8TBE7 412 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 C2orf15Q8WU43 125 aaKnown RBP11.54□□□□□ -0.56
BRCC3-204ENST00000369462 RFFLQ8WZ73 363 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 TIFAQ96CG3 184 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 OSGEPQ9NPF4 335 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 CTTNBP2NLQ9P2B4 639 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 STRIP2Q9ULQ0 834 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 GOLGA6L9A6NEM1 432 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 C2orf71A6NGG8 1288 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 GOLGA8SH3BPF8 625 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 BUB1O43683 1085 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 CYP1A2P05177 515 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 MAGEA11P43364 429 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 GABRB2P47870 512 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 GPR15P49685 360 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 SNX16P57768 344 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 ADIGQ0VDE8 80 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 OR6B2Q6IFH4 312 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 ZNF662Q6ZS27 426 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 GPRIN1Q7Z2K8 1008 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 XYLT1Q86Y38 959 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 CYP4F11Q9HBI6 524 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 HHLA1C9JL84 531 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 PAPSS1O43252 624 aaPredicted RBP11.53□□□□□ -0.56
BRCC3-204ENST00000369462 GJB6O95452 261 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 SEC24AO95486 1093 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 ADH1AP07327 375 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 SPATA31D3P0C874 917 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 KLRC2P26717 231 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 ACADSBP45954 432 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 TKTL1P51854 596 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 SMAD3P84022 425 aaKnown RBP11.53□□□□□ -0.56
BRCC3-204ENST00000369462 SPATA31D4Q6ZUB0 917 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 GPR152Q8TDT2 470 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 KCTD13Q8WZ19 329 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 KLHL5Q96PQ7 755 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 NUP85Q9BW27 656 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 EMILIN2Q9BXX0 1053 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 UBXN6Q9BZV1 441 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 CYLDQ9NQC7 956 aa11.53□□□□□ -0.56
BRCC3-204ENST00000369462 AVENQ9NQS1 362 aaPredicted RBP11.53□□□□□ -0.56
BRCC3-204ENST00000369462 LPXNO60711 386 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 HAPLN1P10915 354 aaPredicted RBP11.52□□□□□ -0.56
BRCC3-204ENST00000369462 ELF1P32519 619 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 RPL34P49207 117 aaKnown RBP11.52□□□□□ -0.56
BRCC3-204ENST00000369462 MAMLD1Q13495 774 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 ZNF268Q14587 947 aaPredicted RBP11.52□□□□□ -0.56
BRCC3-204ENST00000369462 PLEKHA7Q6IQ23 1121 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 DNAJC24Q6P3W2 148 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 FAM183BPQ6ZVS7 135 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 RHOT2Q8IXI1 618 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 SIX6OS1Q8N1H7 587 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 C3orf20Q8ND61 904 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 STKLD1Q8NE28 680 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 SCAMP5Q8TAC9 235 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 GDPD5Q8WTR4 605 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 CLEC4CQ8WTT0 213 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 PIWIL1Q96J94 861 aaKnown RBP11.52□□□□□ -0.56
BRCC3-204ENST00000369462 PARVAQ9NVD7 372 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 WDR35Q9P2L0 1181 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 COG5Q9UP83 839 aa11.52□□□□□ -0.56
BRCC3-204ENST00000369462 EPOPA6NHQ4 379 aa11.52□□□□□ -0.57
BRCC3-204ENST00000369462 TRIM66O15016 1216 aa11.52□□□□□ -0.57
BRCC3-204ENST00000369462 TGM5O43548 720 aa11.52□□□□□ -0.57
BRCC3-204ENST00000369462 MOCS3O95396 460 aa11.52□□□□□ -0.57
BRCC3-204ENST00000369462 TUFMP49411 452 aaKnown RBP11.52□□□□□ -0.57
BRCC3-204ENST00000369462 RNASE9P60153 205 aaKnown RBP11.52□□□□□ -0.57
BRCC3-204ENST00000369462 IFRD2Q12894 506 aaPredicted RBP11.52□□□□□ -0.57
BRCC3-204ENST00000369462 FAM102AQ5T9C2 384 aaPredicted RBP11.52□□□□□ -0.57
BRCC3-204ENST00000369462 NDRG1Q92597 394 aaKnown RBP11.52□□□□□ -0.57
BRCC3-204ENST00000369462 C8orf48Q96LL4 319 aa11.52□□□□□ -0.57
BRCC3-204ENST00000369462 MRPL47Q9HD33 250 aaKnown RBP11.52□□□□□ -0.57
BRCC3-204ENST00000369462 PNPLA8Q9NP80 782 aa11.52□□□□□ -0.57
BRCC3-204ENST00000369462 NCANO14594 1321 aa11.52□□□□□ -0.57
BRCC3-204ENST00000369462 SZT2Q5T011 3432 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 A0A0A6YYK5 440 aaPredicted RBP11.51□□□□□ -0.57
BRCC3-204ENST00000369462 BTNL10A8MVZ5 291 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 RFXAPO00287 272 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 PRRG1O14668 218 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 FSCN2O14926 492 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 KRT3P12035 628 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 SLC5A3P53794 718 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 RPL7AP62424 266 aaKnown RBP11.51□□□□□ -0.57
BRCC3-204ENST00000369462 TAF5Q15542 800 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 RAB41Q5JT25 222 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 DCUN1D2Q6PH85 259 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 ZNF564Q8TBZ8 553 aaPredicted RBP11.51□□□□□ -0.57
BRCC3-204ENST00000369462 MCRS1Q96EZ8 462 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 C16orf45Q96MC5 204 aaPredicted RBP11.51□□□□□ -0.57
BRCC3-204ENST00000369462 SELENOOQ9BVL4 669 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 ULBP1Q9BZM6 244 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 TRIM7Q9C029 511 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 UVRAGQ9P2Y5 699 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 COLQQ9Y215 455 aaPredicted RBP11.51□□□□□ -0.57
BRCC3-204ENST00000369462 SCINQ9Y6U3 715 aa11.51□□□□□ -0.57
BRCC3-204ENST00000369462 PTPRDP23468 1912 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms