RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ARHGAP20Q9P2F6 1191 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 ANKFY1Q9P2R3 1169 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 MBD2Q9UBB5 411 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 MTO1Q9Y2Z2 717 aaKnown RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 N4BP2Q86UW6 1770 aaPredicted RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 DNAJA2O60884 412 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 AFMP43652 599 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 PRAMEP78395 509 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 DAB2P98082 770 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 DPYDQ12882 1025 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 ZNF846Q147U1 533 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 ZBED5Q49AG3 693 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 TCHHL1Q5QJ38 904 aaPredicted RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 SNAP47Q5SQN1 464 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 DUPD1Q68J44 220 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 RFX8Q6ZV50 586 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 HAUS6Q7Z4H7 955 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 NLRX1Q86UT6 975 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 ENKURQ8TC29 256 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 C12orf43Q96C57 262 aaKnown RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 CEP95Q96GE4 821 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 CNBD2Q96M20 576 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 TUBA1CQ9BQE3 449 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 TTPALQ9BTX7 342 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 NOC4LQ9BVI4 516 aaKnown RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 APOL5Q9BWW9 433 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 TRIT1Q9H3H1 467 aaKnown RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 RIC8BQ9NVN3 520 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 THG1LQ9NWX6 298 aaKnown RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 FNIP2Q9P278 1114 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 BCAP29Q9UHQ4 241 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 WBP11Q9Y2W2 641 aaKnown RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 B2RBV5 119 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 RNF103O00237 685 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 CYP21A2P08686 494 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 ALAS2P22557 587 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 PEX2P28328 305 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 FOXN2P32314 431 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 SNX16P57768 344 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 KLRC3Q07444 240 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 NR1H3Q13133 447 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 UBE4AQ14139 1066 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 Q3ZCU0 254 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 RARS2Q5T160 578 aaKnown RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 C15orf52Q6ZUT6 534 aaKnown RBP8.94□□□□□ -0.98
TDP1-201ENST00000335725 ULK2Q8IYT8 1036 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 FBXL6Q8N531 539 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 CCNYL1Q8N7R7 359 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 NXPE3Q969Y0 559 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 MARVELD3Q96A59 401 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 ALPK1Q96QP1 1244 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 EMILIN2Q9BXX0 1053 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 SLA2Q9H6Q3 261 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 PLEKHA5Q9HAU0 1116 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 KMT5AQ9NQR1 393 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 CEP72Q9P209 647 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 SLC7A8Q9UHI5 535 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 AP4B1Q9Y6B7 739 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 MYH10P35580 1976 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 FRMPD4Q14CM0 1322 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 SPHKAPQ2M3C7 1700 aa8.94□□□□□ -0.98
TDP1-201ENST00000335725 OR6C65A6NJZ3 312 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 TLR3O15455 904 aaKnown RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 DYRK3O43781 588 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 IFNA16P05015 189 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 HOXC13P31276 330 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 BMPR1AP36894 532 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 VBP1P61758 197 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 TAP1Q03518 808 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 EARS2Q5JPH6 523 aaKnown RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 EFHC1Q5JVL4 640 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 FAM91A1Q658Y4 838 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 SH3RF1Q7Z6J0 888 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 TMEM126BQ8IUX1 230 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 LINC00518Q8N0U6 118 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 CLYBLQ8N0X4 340 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 CLIP4Q8N3C7 705 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 ERLEC1Q96DZ1 483 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 ERGIC2Q96RQ1 377 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 USB1Q9BQ65 265 aaKnown RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 C17orf62Q9BQA9 187 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 TARS2Q9BW92 718 aaKnown RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 PCDHA4Q9UN74 947 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 SRPRBQ9Y5M8 271 aaKnown RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 A0A1W2PQ72 361 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 SNAP91O60641 907 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 MTHFD1P11586 935 aaKnown RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 OR3A3P47888 321 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 COPZ1P61923 177 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 CTDSPL2Q05D32 466 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 CALCOCO2Q13137 446 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 PDK4Q16654 411 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 ARSHQ5FYA8 562 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 KIAA1755Q5JYT7 1200 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 GSTA5Q7RTV2 222 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 AMIGO2Q86SJ2 522 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 GPBP1Q86WP2 473 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 Q8N9G6 341 aaPredicted RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 ANKS1AQ92625 1134 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 ATP2A3Q93084 1043 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms