RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 LAMTOR4Q0VGL1 99 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 CHSY1Q86X52 802 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 GANCQ8TET4 914 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 ATXN2LQ8WWM7 1075 aaKnown RBP17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 DCUN1D1Q96GG9 259 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 LSM7Q9UK45 103 aaKnown RBP17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 VPS9D1Q9Y2B5 631 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 COL9A3Q14050 684 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 AASDHQ4L235 1098 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 NBPF12Q5TAG4 269 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 BRSK2Q8IWQ3 736 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 CCDC126Q96EE4 140 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 ASB7Q9H672 318 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 KIF17Q9P2E2 1029 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 DDX20Q9UHI6 824 aaKnown RBP17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 SMIM22K7EJ46 135 aa17.71■□□□□ 0.42
TRAPPC11-201ENST00000334690 VWA5AO00534 786 aa17.71■□□□□ 0.42
TRAPPC11-201ENST00000334690 CYBBP04839 570 aa17.71■□□□□ 0.42
TRAPPC11-201ENST00000334690 KBTBD12Q3ZCT8 623 aa17.71■□□□□ 0.42
TRAPPC11-201ENST00000334690 TMEM154Q6P9G4 183 aa17.71■□□□□ 0.42
TRAPPC11-201ENST00000334690 C16orf87Q6PH81 154 aa17.71■□□□□ 0.42
TRAPPC11-201ENST00000334690 NOP9Q86U38 636 aaKnown RBP17.71■□□□□ 0.42
TRAPPC11-201ENST00000334690 IFNEQ86WN2 208 aa17.71■□□□□ 0.42
TRAPPC11-201ENST00000334690 GFM2Q969S9 779 aaKnown RBP17.71■□□□□ 0.42
TRAPPC11-201ENST00000334690 ZNF446Q9NWS9 450 aa17.71■□□□□ 0.42
TRAPPC11-201ENST00000334690 PPP2R3BQ9Y5P8 575 aa17.71■□□□□ 0.42
TRAPPC11-201ENST00000334690 RIMS1Q86UR5 1692 aaKnown RBP17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 PMPCBO75439 489 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 HSPA1AP0DMV8 641 aaKnown RBP17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 HSPA1BP0DMV9 641 aaKnown RBP17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 CALB2P22676 271 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 TNFRSF8P28908 595 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 SERPINB8P50452 374 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 RIC8BQ9NVN3 520 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 H2AFYO75367 372 aaKnown RBP17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 HMBSP08397 361 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 FGRP09769 529 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 ODC1P11926 461 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 AGAP9Q5VTM2 703 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 DENND1BQ6P3S1 775 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 DENND5BQ6ZUT9 1274 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 SLC25A41Q8N5S1 370 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 RNF217Q8TC41 542 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 EPS8L1Q8TE68 723 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 FAR2Q96K12 515 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 E2F8A0AVK6 867 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 FBXO21O94952 628 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 FUT2Q10981 343 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 BAP1Q92560 729 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 SHPRHQ149N8 1683 aa17.7■□□□□ 0.42
TRAPPC11-201ENST00000334690 BTNL10A8MVZ5 291 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 DPYSL4O14531 572 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 B3GAT3O94766 335 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 DDX5P17844 614 aaKnown RBP17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 FLOT2Q14254 428 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 MTFR1Q15390 333 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 FAM131BQ86XD5 332 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 SLC9A9Q8IVB4 645 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 MFN1Q8IWA4 741 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 GLIS3Q8NEA6 775 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 KLK14Q9P0G3 267 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 BARX2Q9UMQ3 279 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 SUPT3HO75486 399 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 CXCL8P10145 99 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 THRAP10827 490 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 CDH2P19022 906 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 GCLCP48506 637 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 SOX10P56693 466 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 SZRD1Q7Z422 152 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 TSEN2Q8NCE0 465 aaKnown RBP17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 OR9Q1Q8NGQ5 310 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 NAF1Q96HR8 494 aaKnown RBP17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 SPATC1LQ9H0A9 340 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 GPATCH2LQ9NWQ4 482 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 TSR3Q9UJK0 312 aaKnown RBP17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 ITGA11Q9UKX5 1188 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 PCDHB8Q9UN66 801 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 NCAM2O15394 837 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 PSMD10O75832 226 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 RCN1Q15293 331 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 SLC30A9Q6PML9 568 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 STKLD1Q8NE28 680 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 TEX12Q9BXU0 123 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 DNAJC18Q9H819 358 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 BLOC1S6Q9UL45 172 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 KCNH4Q9UQ05 1017 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 C16orf96A6NNT2 1141 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 EIF4BP23588 611 aaKnown RBP17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 CASP5P51878 434 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 AMHR2Q16671 573 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 KIZQ2M2Z5 673 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 MRNIPQ6NTE8 343 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 MREGQ8N565 214 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 CD248Q9HCU0 757 aa17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC11-201ENST00000334690 A0A087WZ62 844 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 ACKR2O00590 384 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 MEIS2O14770 477 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 ACAP1Q15027 740 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 THEMIS2Q5TEJ8 643 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms