RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 MMRN1Q13201 1228 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 CRYMQ14894 314 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 DARS2Q6PI48 645 aaKnown RBP15.92■□□□□ 0.14
DDX56-201ENST00000258772 NPNTQ6UXI9 565 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 PLPPR4Q7Z2D5 763 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 NCAPG2Q86XI2 1143 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 TRAPPC12Q8WVT3 735 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 TMEM176AQ96HP8 235 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 FAXDC2Q96IV6 333 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 ZNF570Q96NI8 536 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 PEBP4Q96S96 227 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 SAR1AQ9NR31 198 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 SLC5A4Q9NY91 659 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 KANSL3Q9P2N6 904 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 NKX1-2Q9UD57 310 aaPredicted RBP15.92■□□□□ 0.14
DDX56-201ENST00000258772 DCTN4Q9UJW0 460 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.92■□□□□ 0.14
DDX56-201ENST00000258772 NUMBLQ9Y6R0 609 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.91■□□□□ 0.14
DDX56-201ENST00000258772 IQANK1A0A1B0GTG1 560 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 TCRBV9S1A1TA0A576 114 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 NFICP08651 508 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 PTPN4P29074 926 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 PCK1P35558 622 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 ROR1Q01973 937 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 OVGP1Q12889 678 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 PTK7Q13308 1070 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 CTC1Q2NKJ3 1217 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 KBTBD12Q3ZCT8 623 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 ANKRD20A2Q5SQ80 823 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 ANKRD20A1Q5TYW2 823 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 ANKRD20A3Q5VUR7 823 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 CLNKQ7Z7G1 428 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 ZC3H18Q86VM9 953 aaKnown RBP15.91■□□□□ 0.14
DDX56-201ENST00000258772 RFWD2Q8NHY2 731 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 PTPRN2Q92932 1015 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 ADPGKQ9BRR6 497 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 SPATC1LQ9H0A9 340 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 MINDY3Q9H8M7 445 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 TNFSF13BQ9Y275 285 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 TEX264Q9Y6I9 313 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 KAT6AQ92794 2004 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 LACTBL1A8MY62 500 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 LPXNO60711 386 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 DHRS4L1P0CG22 281 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 EPHB2P29323 1055 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 ZNF143P52747 638 aaPredicted RBP15.91■□□□□ 0.14
DDX56-201ENST00000258772 CDH6P55285 790 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 ZNF200P98182 395 aaPredicted RBP15.91■□□□□ 0.14
DDX56-201ENST00000258772 KCNJ11Q14654 390 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 NAA25Q14CX7 972 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 NOMO1Q15155 1222 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 FAM102AQ5T9C2 384 aaPredicted RBP15.91■□□□□ 0.14
DDX56-201ENST00000258772 SH3PXD2AQ5TCZ1 1133 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 SH2D5Q6ZV89 423 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.91■□□□□ 0.14
DDX56-201ENST00000258772 SLC44A1Q8WWI5 657 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 SERAC1Q96JX3 654 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 RNPEPL1Q9HAU8 725 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 ALG13Q9NP73 1137 aaKnown RBP15.91■□□□□ 0.14
DDX56-201ENST00000258772 LNPEPQ9UIQ6 1025 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 IKBKGQ9Y6K9 419 aa15.91■□□□□ 0.14
DDX56-201ENST00000258772 KBTBD13C9JR72 458 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 M0QYV0 167 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 GPR25O00155 361 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 NOP56O00567 594 aaKnown RBP15.9■□□□□ 0.14
DDX56-201ENST00000258772 PEX11AO75192 247 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 ITGB3P05106 788 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 GM2AP17900 193 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 CALB2P22676 271 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 ETV4P43268 484 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 MBTD1Q05BQ5 628 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 CELF3Q5SZQ8 465 aaKnown RBP15.9■□□□□ 0.14
DDX56-201ENST00000258772 WDR78Q5VTH9 848 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 LRRC6Q86X45 466 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 KIRREL3Q8IZU9 778 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 CXorf38Q8TB03 319 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 TRPM4Q8TD43 1214 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 TRIM55Q9BYV6 548 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.9■□□□□ 0.14
DDX56-201ENST00000258772 POLR2AP24928 1970 aaKnown RBP15.9■□□□□ 0.14
DDX56-201ENST00000258772 PTPRFP10586 1907 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 IQCF3P0C7M6 154 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 NEK3P51956 506 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 SLC18A2Q05940 514 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 FAAP100Q0VG06 881 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 RAB6CQ53S08 254 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 SYCP2LQ5T4T6 812 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 JADE1Q6IE81 842 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 EFCAB12Q6NXP0 572 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 CYP4V2Q6ZWL3 525 aaPredicted RBP15.9■□□□□ 0.14
DDX56-201ENST00000258772 CHSY1Q86X52 802 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 UBA3Q8TBC4 463 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 ZBTB10Q96DT7 871 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 HEXIM2Q96MH2 286 aaKnown RBP15.9■□□□□ 0.14
DDX56-201ENST00000258772 CNPY3Q9BT09 278 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 TSSK1BQ9BXA7 367 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 RAB6CQ9H0N0 254 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 TLE6Q9H808 572 aa15.9■□□□□ 0.14
DDX56-201ENST00000258772 GGA3Q9NZ52 723 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms