RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PRCCQ92733 491 aaPredicted RBP11.48□□□□□ -0.57
MSH6-201ENST00000234420 ELOVL6Q9H5J4 265 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 TNFSF13BQ9Y275 285 aa11.48□□□□□ -0.57
MSH6-201ENST00000234420 E9PBE3 544 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 ATP6V1B2P21281 511 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 CCNCP24863 283 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 SESN2P58004 480 aaPredicted RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 IL5RAQ01344 420 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 MTF1Q14872 753 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 TAF13Q15543 124 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 CHI3L2Q15782 390 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 AGBL2Q5U5Z8 902 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 EFCAB12Q6NXP0 572 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 UBA3Q8TBC4 463 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 C18orf25Q96B23 403 aaPredicted RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 C9orf72Q96LT7 481 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 POLR1DQ9Y2S0 133 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 TIAM1Q13009 1591 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 SH3BGRLO75368 114 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 VTNP04004 478 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 URODP06132 367 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 ZNF286BP0CG31 522 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 TRAF3Q13114 568 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 DHX34Q14147 1143 aaKnown RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 KIAA0408Q6ZU52 694 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 ATPAF2Q8N5M1 289 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 FAM172AQ8WUF8 416 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 SPIRE2Q8WWL2 714 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 ZKSCAN4Q969J2 545 aaPredicted RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 TRIM62Q9BVG3 475 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 FOXP1Q9H334 677 aaPredicted RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 TASP1Q9H6P5 420 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 CCDC59Q9P031 241 aaKnown RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 KRT36O76013 467 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 MYL2P10916 166 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 GPC1P35052 558 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 ORC1Q13415 861 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 TFDP2Q14188 446 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 ZNF697Q5TEC3 545 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 LRIG3Q6UXM1 1119 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 HPS1Q92902 700 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 HMG20AQ9NP66 347 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 UVRAGQ9P2Y5 699 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 COQ6Q9Y2Z9 468 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 C17orf102A2RUQ5 167 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 KCNK10P57789 538 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 EXOSC10Q01780 885 aaKnown RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 THOC7Q6I9Y2 204 aaKnown RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 TMEM179Q6ZVK1 233 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 CD209Q9NNX6 404 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 PEG3Q9GZU2 1588 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 CCDC189A1A4V9 331 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 CDH16O75309 829 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 ALOX15P16050 662 aaPredicted RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 CHRM3P20309 590 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 UAP1L1Q3KQV9 507 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 DCAF6Q58WW2 860 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 CES5AQ6NT32 575 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 RNF44Q7L0R7 432 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 APOL4Q9BPW4 351 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 UBXN6Q9BZV1 441 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 THG1LQ9NWX6 298 aaKnown RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 TMEM94Q12767 1356 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 BAZ2BQ9UIF8 2168 aaKnown RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 RTN3O95197 1032 aaPredicted RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 HLA-DQA2P01906 255 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 CCDC130P13994 396 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 GMPSP49915 693 aaPredicted RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 NR1D2Q14995 579 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 TMEM132DQ14C87 1099 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 DGUOKQ16854 277 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 PGS1Q32NB8 556 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 ULK3Q6PHR2 472 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 CCNI2Q6ZMN8 369 aaPredicted RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 ZBTB49Q6ZSB9 765 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 GPRC5AQ8NFJ5 357 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 THUMPD3Q9BV44 507 aaKnown RBP11.47□□□□□ -0.57
MSH6-201ENST00000234420 BFARQ9NZS9 450 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 CEP72Q9P209 647 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 AGAP1Q9UPQ3 857 aa11.47□□□□□ -0.57
MSH6-201ENST00000234420 PSMD14O00487 310 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 ADCY6O43306 1168 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 NCAM1P13591 858 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 MCCD1P59942 119 aaPredicted RBP11.46□□□□□ -0.57
MSH6-201ENST00000234420 SERAC1Q96JX3 654 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 MKNK1Q9BUB5 465 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 JMJD4Q9H9V9 463 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 KIAA0586Q9BVV6 1533 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 PDE8BO95263 885 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 CAMK2GQ13555 558 aaPredicted RBP11.46□□□□□ -0.57
MSH6-201ENST00000234420 CINPQ9BW66 212 aaPredicted RBP11.46□□□□□ -0.57
MSH6-201ENST00000234420 GRIP2Q9C0E4 1043 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 COL17A1Q9UMD9 1497 aaPredicted RBP11.46□□□□□ -0.57
MSH6-201ENST00000234420 ABCB1P08183 1280 aaPredicted RBP11.46□□□□□ -0.57
MSH6-201ENST00000234420 CASP1P29466 404 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 ACOX1Q15067 660 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 PDIA6Q15084 440 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 B3GNT6Q6ZMB0 384 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 CACTIN-AS1Q8N1I8 211 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms