RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A URM1P40554 99 aaPredicted RBP11.19□□□□□ -0.62
TRN1tP(UGG)A PKR1Q03880 122 aaKnown RBP11.17□□□□□ -0.62
TRN1tP(UGG)A COA6Q3E846 104 aa11.17□□□□□ -0.62
TRN1tP(UGG)A MDN1Q12019 4910 aaKnown RBP11.16□□□□□ -0.62
TRN1tP(UGG)A TRP1P00912 224 aa11.15□□□□□ -0.62
TRN1tP(UGG)A RPL27BP0C2H7 136 aaKnown RBP11.15□□□□□ -0.62
TRN1tP(UGG)A PAU16P35994 123 aa11.15□□□□□ -0.62
TRN1tP(UGG)A FYV4P38783 130 aaPredicted RBP11.15□□□□□ -0.62
TRN1tP(UGG)A COA3Q3E7B2 85 aa11.15□□□□□ -0.62
TRN1tP(UGG)A PBA1Q05778 276 aa11.14□□□□□ -0.63
TRN1tP(UGG)A YLR112WQ12130 139 aa11.14□□□□□ -0.63
TRN1tP(UGG)A YER085CP40058 173 aa11.12□□□□□ -0.63
TRN1tP(UGG)A CNL1Q06333 122 aa11.12□□□□□ -0.63
TRN1tP(UGG)A RPL33AP05744 107 aaKnown RBP11.11□□□□□ -0.63
TRN1tP(UGG)A RPL33BP41056 107 aaKnown RBP11.11□□□□□ -0.63
TRN1tP(UGG)A YMR103CQ04436 120 aa11.11□□□□□ -0.63
TRN1tP(UGG)A YCL021W-AQ96VH3 125 aa11.11□□□□□ -0.63
TRN1tP(UGG)A APS1P35181 156 aa11.1□□□□□ -0.63
TRN1tP(UGG)A YEL008WP40001 126 aa11.1□□□□□ -0.63
TRN1tP(UGG)A YLL066W-BQ8TGJ7 56 aa11.1□□□□□ -0.63
TRN1tP(UGG)A YPR010C-AA5Z2X5 72 aa11.07□□□□□ -0.64
TRN1tP(UGG)A SVP26P38869 228 aa11.07□□□□□ -0.64
TRN1tP(UGG)A YMR320WQ04897 101 aa11.07□□□□□ -0.64
TRN1tP(UGG)A TPT1Q12272 230 aaKnown RBP11.07□□□□□ -0.64
TRN1tP(UGG)A DIF1O13577 133 aa11.06□□□□□ -0.64
TRN1tP(UGG)A RTC6O14464 93 aa11.06□□□□□ -0.64
TRN1tP(UGG)A RPL31AP0C2H8 113 aaKnown RBP11.06□□□□□ -0.64
TRN1tP(UGG)A SCS22Q6Q595 175 aa11.06□□□□□ -0.64
TRN1tP(UGG)A YLR050CQ12155 161 aaKnown RBP11.05□□□□□ -0.64
TRN1tP(UGG)A YKL070WP36087 169 aa11.04□□□□□ -0.64
TRN1tP(UGG)A RPL11AP0C0W9 174 aaKnown RBP11.03□□□□□ -0.64
TRN1tP(UGG)A ATP15P21306 62 aa11.03□□□□□ -0.64
TRN1tP(UGG)A ERG28P40030 148 aa11.03□□□□□ -0.64
TRN1tP(UGG)A RPL11BQ3E757 174 aaPredicted RBP11.03□□□□□ -0.64
TRN1tP(UGG)A YDR115WQ04598 105 aa11.02□□□□□ -0.65
TRN1tP(UGG)A HAC1P41546 238 aa11.01□□□□□ -0.65
TRN1tP(UGG)A RRT15Q3E811 62 aa11.01□□□□□ -0.65
TRN1tP(UGG)A YBR219CP38317 127 aa11□□□□□ -0.65
TRN1tP(UGG)A SEC11P15367 167 aa10.99□□□□□ -0.65
TRN1tP(UGG)A NUP42P49686 430 aaKnown RBP10.99□□□□□ -0.65
TRN1tP(UGG)A YAR029WP39549 74 aa10.98□□□□□ -0.65
TRN1tP(UGG)A YPR195CQ06594 109 aa10.98□□□□□ -0.65
TRN1tP(UGG)A DFM1Q12743 341 aaKnown RBP10.98□□□□□ -0.65
TRN1tP(UGG)A ENV10Q99382 181 aa10.98□□□□□ -0.65
TRN1tP(UGG)A AIM11P87275 137 aa10.97□□□□□ -0.65
TRN1tP(UGG)A FUN14P18411 198 aa10.96□□□□□ -0.65
TRN1tP(UGG)A YGL230CP53074 147 aa10.96□□□□□ -0.65
TRN1tP(UGG)A YMR295CQ03559 197 aa10.96□□□□□ -0.65
TRN1tP(UGG)A YPL261CQ08976 102 aa10.95□□□□□ -0.66
TRN1tP(UGG)A MSL1P40567 111 aaPredicted RBP10.94□□□□□ -0.66
TRN1tP(UGG)A LSM8P47093 109 aaKnown RBP10.94□□□□□ -0.66
TRN1tP(UGG)A CGR1P53188 120 aa10.94□□□□□ -0.66
TRN1tP(UGG)A YLR194CQ05777 254 aa10.94□□□□□ -0.66
TRN1tP(UGG)A RPL32P38061 130 aaKnown RBP10.92□□□□□ -0.66
TRN1tP(UGG)A BET5Q03630 159 aa10.92□□□□□ -0.66
TRN1tP(UGG)A VTS1Q08831 523 aaKnown RBP RIP-Chip data10.92□□□□□ -0.66not detected
TRN1tP(UGG)A YDL022C-AP0C5L6 82 aa10.91□□□□□ -0.66
TRN1tP(UGG)A MRPL44P19956 98 aa10.91□□□□□ -0.66
TRN1tP(UGG)A YAL064WP39711 94 aa10.91□□□□□ -0.66
TRN1tP(UGG)A YDL157CQ12082 118 aa10.9□□□□□ -0.66
TRN1tP(UGG)A YKL044WP36092 106 aa10.89□□□□□ -0.67
TRN1tP(UGG)A SHU1P38751 150 aa10.89□□□□□ -0.67
TRN1tP(UGG)A RPC10P40422 70 aa10.89□□□□□ -0.67
TRN1tP(UGG)A NAT5Q08689 176 aa10.89□□□□□ -0.67
TRN1tP(UGG)A YAR023CD6VPM8 179 aa10.88□□□□□ -0.67
TRN1tP(UGG)A ANB1P19211 157 aa10.88□□□□□ -0.67
TRN1tP(UGG)A FYV7Q12247 151 aa10.88□□□□□ -0.67
TRN1tP(UGG)A YKR041WP36134 250 aa10.87□□□□□ -0.67
TRN1tP(UGG)A YBL081WP38180 368 aaKnown RBP10.87□□□□□ -0.67
TRN1tP(UGG)A RPL18AP0CX49 186 aaKnown RBP10.86□□□□□ -0.67
TRN1tP(UGG)A RPL18BP0CX50 186 aaKnown RBP10.86□□□□□ -0.67
TRN1tP(UGG)A YMR175W-AQ3E766 64 aa10.86□□□□□ -0.67
TRN1tP(UGG)A PEX17P40155 199 aa10.85□□□□□ -0.67
TRN1tP(UGG)A YPL073CP40323 161 aa10.84□□□□□ -0.67
TRN1tP(UGG)A SCM4P32564 187 aa10.82□□□□□ -0.68
TRN1tP(UGG)A ATP5P09457 212 aa10.81□□□□□ -0.68
TRN1tP(UGG)A YEL067CP39978 195 aa10.81□□□□□ -0.68
TRN1tP(UGG)A CIN5P40917 295 aa10.81□□□□□ -0.68
TRN1tP(UGG)A YCR007CP25354 239 aa10.8□□□□□ -0.68
TRN1tP(UGG)A PPT2Q12036 173 aa10.8□□□□□ -0.68
TRN1tP(UGG)A YAL065CO13511 128 aa10.79□□□□□ -0.68
TRN1tP(UGG)A RPL28P02406 149 aaKnown RBP10.79□□□□□ -0.68
TRN1tP(UGG)A COX14P39103 70 aa10.79□□□□□ -0.68
TRN1tP(UGG)A RPF1P38805 295 aaKnown RBP10.76□□□□□ -0.69
TRN1tP(UGG)A TOA2P32774 122 aa10.75□□□□□ -0.69
TRN1tP(UGG)A VTC1P40046 129 aaRIP-Chip data10.75□□□□□ -0.69not detected
TRN1tP(UGG)A MRPS12P53732 153 aa10.75□□□□□ -0.69
TRN1tP(UGG)A YNR077CP53758 84 aa10.75□□□□□ -0.69
TRN1tP(UGG)A SNA2P56508 79 aa10.75□□□□□ -0.69
TRN1tP(UGG)A IGO2Q9P305 131 aa10.75□□□□□ -0.69
TRN1tP(UGG)A ADH1P00330 348 aaKnown RBP10.74□□□□□ -0.69
TRN1tP(UGG)A GAT4P40569 121 aa10.74□□□□□ -0.69
TRN1tP(UGG)A QCR8P08525 94 aa10.73□□□□□ -0.69
TRN1tP(UGG)A YDR034C-AP0C289 58 aa10.73□□□□□ -0.69
TRN1tP(UGG)A MRP10O75012 95 aa10.72□□□□□ -0.69
TRN1tP(UGG)A YDL241WQ07738 123 aa10.72□□□□□ -0.69
TRN1tP(UGG)A YPL229WQ99395 206 aa10.72□□□□□ -0.69
TRN1tP(UGG)A LCL2Q08045 131 aa10.71□□□□□ -0.69
TRN1tP(UGG)A YDR029WQ12111 104 aa10.71□□□□□ -0.69
TRN1tP(UGG)A YNL190WP53872 204 aa10.7□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms