RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W SEC4P07560 215 aaKnown RBP6.99□□□□□ -1.29
MSF1YPR047W RPL42AP0CX27 106 aaKnown RBP6.99□□□□□ -1.29
MSF1YPR047W RPL42BP0CX28 106 aaKnown RBP6.99□□□□□ -1.29
MSF1YPR047W GSP1P32835 219 aaKnown RBP6.99□□□□□ -1.29
MSF1YPR047W GSP2P32836 220 aaKnown RBP6.99□□□□□ -1.29
MSF1YPR047W PAU7P39545 55 aa6.99□□□□□ -1.29
MSF1YPR047W GTO3Q04806 366 aa6.99□□□□□ -1.29
MSF1YPR047W YAR023CD6VPM8 179 aa6.98□□□□□ -1.29
MSF1YPR047W TPT1Q12272 230 aaKnown RBP6.98□□□□□ -1.29
MSF1YPR047W MRP49P32388 137 aa6.97□□□□□ -1.29
MSF1YPR047W SAE3P89114 91 aa6.97□□□□□ -1.29
MSF1YPR047W BET5Q03630 159 aa6.97□□□□□ -1.29
MSF1YPR047W MHR1Q06630 226 aa6.97□□□□□ -1.29
MSF1YPR047W SDS23P53172 527 aa6.96□□□□□ -1.3
MSF1YPR047W DFM1Q12743 341 aaKnown RBP6.96□□□□□ -1.3
MSF1YPR047W RPL23AP0CX41 137 aaKnown RBP6.95□□□□□ -1.3
MSF1YPR047W RPL23BP0CX42 137 aaKnown RBP6.95□□□□□ -1.3
MSF1YPR047W SEC72P39742 193 aaKnown RBP6.95□□□□□ -1.3
MSF1YPR047W DCV1P43595 202 aa6.95□□□□□ -1.3
MSF1YPR047W FSF1Q12029 327 aaKnown RBP6.95□□□□□ -1.3
MSF1YPR047W ERG28P40030 148 aa6.94□□□□□ -1.3
MSF1YPR047W NAT5Q08689 176 aa6.94□□□□□ -1.3
MSF1YPR047W YCR007CP25354 239 aa6.93□□□□□ -1.3
MSF1YPR047W GLC8P41818 229 aa6.93□□□□□ -1.3
MSF1YPR047W RPL31AP0C2H8 113 aaKnown RBP6.93□□□□□ -1.3
MSF1YPR047W RPL16AP26784 199 aaKnown RBP6.93□□□□□ -1.3
MSF1YPR047W YIL059CP40520 121 aa6.93□□□□□ -1.3
MSF1YPR047W PAU23Q07987 124 aa6.93□□□□□ -1.3
MSF1YPR047W YDL157CQ12082 118 aa6.93□□□□□ -1.3
MSF1YPR047W PAU17Q12370 124 aa6.93□□□□□ -1.3
MSF1YPR047W PKR1Q03880 122 aaKnown RBP6.91□□□□□ -1.3
MSF1YPR047W YPR014CQ6B0W2 109 aa6.91□□□□□ -1.3
MSF1YPR047W FYV4P38783 130 aaPredicted RBP6.9□□□□□ -1.31
MSF1YPR047W WIP1Q2V2P8 89 aa6.9□□□□□ -1.31
MSF1YPR047W SEC11P15367 167 aa6.89□□□□□ -1.31
MSF1YPR047W YKR032WP36127 104 aa6.89□□□□□ -1.31
MSF1YPR047W YBR209WP38311 105 aa6.89□□□□□ -1.31
MSF1YPR047W HAC1P41546 238 aa6.89□□□□□ -1.31
MSF1YPR047W YGL230CP53074 147 aa6.89□□□□□ -1.31
MSF1YPR047W YLR050CQ12155 161 aaKnown RBP6.89□□□□□ -1.31
MSF1YPR047W YFL067WP43537 175 aa6.88□□□□□ -1.31
MSF1YPR047W YGL088WP53151 121 aa6.88□□□□□ -1.31
MSF1YPR047W HAP3P13434 144 aa6.87□□□□□ -1.31
MSF1YPR047W UIP3P39547 235 aa6.87□□□□□ -1.31
MSF1YPR047W YDR029WQ12111 104 aa6.87□□□□□ -1.31
MSF1YPR047W HTL1Q9URQ5 78 aa6.87□□□□□ -1.31
MSF1YPR047W YER076CP40049 302 aa6.86□□□□□ -1.31
MSF1YPR047W POP3P53833 195 aaPredicted RBP6.86□□□□□ -1.31
MSF1YPR047W MSL1P40567 111 aaPredicted RBP6.85□□□□□ -1.31
MSF1YPR047W GLO1P50107 326 aa6.85□□□□□ -1.31
MSF1YPR047W YLR307C-AQ3E825 87 aa6.85□□□□□ -1.31
MSF1YPR047W YKR070WP36151 352 aaKnown RBP6.84□□□□□ -1.31
MSF1YPR047W LCL1Q02786 101 aa6.84□□□□□ -1.31
MSF1YPR047W AIM29P36154 155 aa6.84□□□□□ -1.32
MSF1YPR047W YAL064WP39711 94 aa6.84□□□□□ -1.32
MSF1YPR047W CWC27Q02770 301 aa6.84□□□□□ -1.32
MSF1YPR047W ADH2P00331 348 aaKnown RBP6.83□□□□□ -1.32
MSF1YPR047W YBL081WP38180 368 aaKnown RBP6.83□□□□□ -1.32
MSF1YPR047W PET8P38921 284 aa6.83□□□□□ -1.32
MSF1YPR047W YER085CP40058 173 aa6.83□□□□□ -1.32
MSF1YPR047W RPC10P40422 70 aa6.83□□□□□ -1.32
MSF1YPR047W SNA2P56508 79 aa6.83□□□□□ -1.32
MSF1YPR047W YIL014C-AQ02598 104 aa6.83□□□□□ -1.32
MSF1YPR047W YDR042CQ03205 200 aa6.83□□□□□ -1.32
MSF1YPR047W YLR194CQ05777 254 aa6.83□□□□□ -1.32
MSF1YPR047W MGR2Q02889 113 aa6.82□□□□□ -1.32
MSF1YPR047W ENV10Q99382 181 aa6.82□□□□□ -1.32
MSF1YPR047W CIN5P40917 295 aa6.81□□□□□ -1.32
MSF1YPR047W RPL27BP0C2H7 136 aaKnown RBP6.8□□□□□ -1.32
MSF1YPR047W YJR146WP47174 117 aa6.8□□□□□ -1.32
MSF1YPR047W SCS22Q6Q595 175 aa6.8□□□□□ -1.32
MSF1YPR047W TRP1P00912 224 aa6.79□□□□□ -1.32
MSF1YPR047W PFY1P07274 126 aa6.78□□□□□ -1.32
MSF1YPR047W APS1P35181 156 aa6.78□□□□□ -1.32
MSF1YPR047W YCL021W-AQ96VH3 125 aa6.78□□□□□ -1.32
MSF1YPR047W YKL044WP36092 106 aa6.77□□□□□ -1.33
MSF1YPR047W SMP1P38128 452 aa6.77□□□□□ -1.33
MSF1YPR047W MMS2P53152 137 aa6.77□□□□□ -1.33
MSF1YPR047W YEL008WP40001 126 aa6.76□□□□□ -1.33
MSF1YPR047W YPR170W-BP0C5R9 85 aa6.76□□□□□ -1.33
MSF1YPR047W YBR219CP38317 127 aa6.76□□□□□ -1.33
MSF1YPR047W TOS6P48560 102 aa6.76□□□□□ -1.33
MSF1YPR047W YOR008C-AQ3E7B9 74 aa6.76□□□□□ -1.33
MSF1YPR047W AQY1P0CD91 305 aa6.75□□□□□ -1.33
MSF1YPR047W YML079WQ03629 201 aa6.75□□□□□ -1.33
MSF1YPR047W YLR363W-AQ3E747 85 aa6.75□□□□□ -1.33
MSF1YPR047W YMR175W-AQ3E766 64 aa6.75□□□□□ -1.33
MSF1YPR047W YAR029WP39549 74 aa6.74□□□□□ -1.33
MSF1YPR047W YMR103CQ04436 120 aa6.74□□□□□ -1.33
MSF1YPR047W PRE1P22141 198 aaKnown RBP6.73□□□□□ -1.33
MSF1YPR047W PCL2P25693 308 aa6.73□□□□□ -1.33
MSF1YPR047W YLR112WQ12130 139 aa6.73□□□□□ -1.33
MSF1YPR047W MBF1O14467 151 aaKnown RBP6.71□□□□□ -1.34
MSF1YPR047W PEX22P39718 180 aa6.71□□□□□ -1.34
MSF1YPR047W TMA7Q3E764 64 aaKnown RBP6.71□□□□□ -1.34
MSF1YPR047W VTC1P40046 129 aaRIP-Chip data6.7□□□□□ -1.34not detected
MSF1YPR047W URM1P40554 99 aaPredicted RBP6.7□□□□□ -1.34
MSF1YPR047W YJL197C-AP0C5P0 93 aa6.69□□□□□ -1.34
MSF1YPR047W RPL32P38061 130 aaKnown RBP6.69□□□□□ -1.34
MSF1YPR047W YMR295CQ03559 197 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 154.3 ms