RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W YAR029WP39549 74 aa2.52□□□□□ -2.01
RET3YPL010W VTC1P40046 129 aaRIP-Chip data2.52□□□□□ -2.01not detected
RET3YPL010W YER076CP40049 302 aa2.52□□□□□ -2.01
RET3YPL010W YGL149WP53116 101 aa2.52□□□□□ -2.01
RET3YPL010W GTO3Q04806 366 aa2.52□□□□□ -2.01
RET3YPL010W ARC18Q05933 178 aaKnown RBP2.52□□□□□ -2.01
RET3YPL010W NAT3Q06504 195 aa2.52□□□□□ -2.01
RET3YPL010W POM33Q12164 279 aa2.52□□□□□ -2.01
RET3YPL010W YLR118CQ12354 227 aa2.52□□□□□ -2.01
RET3YPL010W YCL001W-BQ96VH2 84 aa2.52□□□□□ -2.01
RET3YPL010W MID2P36027 376 aa2.51□□□□□ -2.01
RET3YPL010W AIM29P36154 155 aa2.51□□□□□ -2.01
RET3YPL010W YER085CP40058 173 aa2.51□□□□□ -2.01
RET3YPL010W HIT1P46973 164 aa2.51□□□□□ -2.01
RET3YPL010W YGR149WP48236 432 aa2.51□□□□□ -2.01
RET3YPL010W CMC4Q3E7A9 73 aa2.51□□□□□ -2.01
RET3YPL010W TRP1P00912 224 aa2.5□□□□□ -2.01
RET3YPL010W HMRA1P0CY11 126 aa2.5□□□□□ -2.01
RET3YPL010W SRP14P38985 146 aa2.5□□□□□ -2.01
RET3YPL010W YGL088WP53151 121 aa2.5□□□□□ -2.01
RET3YPL010W KTI11Q3E840 82 aa2.5□□□□□ -2.01
RET3YPL010W YKL070WP36087 169 aa2.49□□□□□ -2.01
RET3YPL010W PHS1P40857 217 aa2.49□□□□□ -2.01
RET3YPL010W EOS1P53938 366 aa2.49□□□□□ -2.01
RET3YPL010W YFL019CP43576 117 aa2.48□□□□□ -2.01
RET3YPL010W YDL241WQ07738 123 aa2.48□□□□□ -2.01
RET3YPL010W YOR008C-AQ3E7B9 74 aa2.48□□□□□ -2.01
RET3YPL010W HSP10P38910 106 aa2.47□□□□□ -2.01
RET3YPL010W YEL008WP40001 126 aa2.47□□□□□ -2.01
RET3YPL010W CWP2P43497 92 aa2.47□□□□□ -2.01
RET3YPL010W YJR146WP47174 117 aa2.47□□□□□ -2.01
RET3YPL010W DAN1P47178 298 aa2.47□□□□□ -2.01
RET3YPL010W SNN1P48232 102 aa2.47□□□□□ -2.01
RET3YPL010W PLP1Q04004 230 aa2.47□□□□□ -2.01
RET3YPL010W Q0032Q9ZZX7 96 aa2.47□□□□□ -2.01
RET3YPL010W AQY2P0CD90 149 aa2.46□□□□□ -2.02
RET3YPL010W APS1P35181 156 aa2.46□□□□□ -2.02
RET3YPL010W PKR1Q03880 122 aaKnown RBP2.46□□□□□ -2.02
RET3YPL010W WIP1Q2V2P8 89 aa2.46□□□□□ -2.02
RET3YPL010W YAL065CO13511 128 aa2.45□□□□□ -2.02
RET3YPL010W PFY1P07274 126 aa2.45□□□□□ -2.02
RET3YPL010W YGL010WP25338 174 aa2.45□□□□□ -2.02
RET3YPL010W LDS1P31379 325 aa2.45□□□□□ -2.02
RET3YPL010W YKR032WP36127 104 aa2.45□□□□□ -2.02
RET3YPL010W YBR219CP38317 127 aa2.45□□□□□ -2.02
RET3YPL010W APS2Q00381 147 aa2.45□□□□□ -2.02
RET3YPL010W SMD1Q02260 146 aaPredicted RBP2.45□□□□□ -2.02
RET3YPL010W YMR295CQ03559 197 aa2.45□□□□□ -2.02
RET3YPL010W YNR034W-AQ3E841 98 aa2.45□□□□□ -2.02
RET3YPL010W PAU19P0CE85 124 aa2.44□□□□□ -2.02
RET3YPL010W PAU21P0CE86 164 aa2.44□□□□□ -2.02
RET3YPL010W PAU22P0CE87 164 aa2.44□□□□□ -2.02
RET3YPL010W YLR156WP0CE96 114 aa2.44□□□□□ -2.02
RET3YPL010W YLR159WP0CE97 114 aa2.44□□□□□ -2.02
RET3YPL010W YLR161WP0CE98 114 aa2.44□□□□□ -2.02
RET3YPL010W RPL23AP0CX41 137 aaKnown RBP2.44□□□□□ -2.02
RET3YPL010W RPL23BP0CX42 137 aaKnown RBP2.44□□□□□ -2.02
RET3YPL010W UBC4P15731 148 aa2.44□□□□□ -2.02
RET3YPL010W PAU3P25610 124 aa2.44□□□□□ -2.02
RET3YPL010W DAD2P36162 133 aa2.44□□□□□ -2.02
RET3YPL010W PAU15P40585 124 aa2.44□□□□□ -2.02
RET3YPL010W STF1P01098 86 aa2.43□□□□□ -2.02
RET3YPL010W POR1P04840 283 aaKnown RBP2.43□□□□□ -2.02
RET3YPL010W PAM17P36147 197 aa2.43□□□□□ -2.02
RET3YPL010W OXA1P39952 402 aa2.43□□□□□ -2.02
RET3YPL010W TOS6P48560 102 aa2.43□□□□□ -2.02
RET3YPL010W YOR268CQ08734 132 aa2.43□□□□□ -2.02
RET3YPL010W NHP6AP11632 93 aaKnown RBP2.42□□□□□ -2.02
RET3YPL010W BNS1P50084 137 aa2.42□□□□□ -2.02
RET3YPL010W KNH1P50112 268 aa2.42□□□□□ -2.02
RET3YPL010W UBC12P52491 188 aa2.42□□□□□ -2.02
RET3YPL010W ABF2Q02486 183 aa2.42□□□□□ -2.02
RET3YPL010W MGR2Q02889 113 aa2.42□□□□□ -2.02
RET3YPL010W FSF1Q12029 327 aaKnown RBP2.42□□□□□ -2.02
RET3YPL010W TPT1Q12272 230 aaKnown RBP2.42□□□□□ -2.02
RET3YPL010W KSH1Q8TGJ3 72 aa2.42□□□□□ -2.02
RET3YPL010W RPL31AP0C2H8 113 aaKnown RBP2.41□□□□□ -2.02
RET3YPL010W CNB1P25296 175 aa2.41□□□□□ -2.02
RET3YPL010W SRB6P32570 121 aa2.41□□□□□ -2.02
RET3YPL010W YGL193CP53097 103 aa2.41□□□□□ -2.02
RET3YPL010W ERV14P53173 138 aa2.41□□□□□ -2.02
RET3YPL010W YDR042CQ03205 200 aa2.41□□□□□ -2.02
RET3YPL010W YOP1Q12402 180 aa2.41□□□□□ -2.02
RET3YPL010W YPR014CQ6B0W2 109 aa2.41□□□□□ -2.02
RET3YPL010W ADH3P07246 375 aaKnown RBP2.4□□□□□ -2.03
RET3YPL010W YBL039W-BP0C268 59 aa2.4□□□□□ -2.03
RET3YPL010W YER039C-AP0CD97 72 aa2.4□□□□□ -2.03
RET3YPL010W PET8P38921 284 aa2.4□□□□□ -2.03
RET3YPL010W COX14P39103 70 aa2.4□□□□□ -2.03
RET3YPL010W MVB12P42939 101 aa2.4□□□□□ -2.03
RET3YPL010W VMA9Q3E7B6 73 aa2.4□□□□□ -2.03
RET3YPL010W PAU16P35994 123 aa2.39□□□□□ -2.03
RET3YPL010W EDC2P40023 145 aaPredicted RBP2.39□□□□□ -2.03
RET3YPL010W YJR085CP47131 105 aaKnown RBP2.39□□□□□ -2.03
RET3YPL010W CMC2Q3E7A4 109 aa2.39□□□□□ -2.03
RET3YPL010W HTL1Q9URQ5 78 aa2.39□□□□□ -2.03
RET3YPL010W PRE1P22141 198 aaKnown RBP2.38□□□□□ -2.03
RET3YPL010W SCM4P32564 187 aa2.38□□□□□ -2.03
RET3YPL010W TOA2P32774 122 aa2.38□□□□□ -2.03
RET3YPL010W NTF2P33331 125 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms