RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W YER181CP40097 107 aa5.66□□□□□ -1.5
SNF7YLR025W YDL186WP48568 277 aa5.66□□□□□ -1.5
SNF7YLR025W YMR244WQ04018 355 aa5.66□□□□□ -1.5
SNF7YLR025W COA3Q3E7B2 85 aa5.66□□□□□ -1.5
SNF7YLR025W MIG3P39943 394 aa5.65□□□□□ -1.5
SNF7YLR025W AIM34Q03673 198 aa5.65□□□□□ -1.5
SNF7YLR025W MRPL23Q12487 163 aaPredicted RBP5.65□□□□□ -1.5
SNF7YLR025W YIL102C-AQ2V2P5 75 aa5.65□□□□□ -1.5
SNF7YLR025W TOR1P35169 2470 aa5.64□□□□□ -1.51
SNF7YLR025W YER145C-AA0A023PYF4 145 aa5.64□□□□□ -1.51
SNF7YLR025W ADH2P00331 348 aaKnown RBP5.64□□□□□ -1.51
SNF7YLR025W RPL15AP05748 204 aaKnown RBP5.64□□□□□ -1.51
SNF7YLR025W YBR209WP38311 105 aa5.64□□□□□ -1.51
SNF7YLR025W MRPS8Q03799 155 aa5.64□□□□□ -1.51
SNF7YLR025W YLR042CQ07990 161 aa5.64□□□□□ -1.51
SNF7YLR025W IGO2Q9P305 131 aa5.64□□□□□ -1.51
SNF7YLR025W HYP2P23301 157 aaKnown RBP5.63□□□□□ -1.51
SNF7YLR025W VHS2P40463 436 aa5.63□□□□□ -1.51
SNF7YLR025W AIM11P87275 137 aa5.63□□□□□ -1.51
SNF7YLR025W ATP15P21306 62 aa5.62□□□□□ -1.51
SNF7YLR025W CCW14O13547 238 aa5.61□□□□□ -1.51
SNF7YLR025W YKR041WP36134 250 aa5.61□□□□□ -1.51
SNF7YLR025W OXA1P39952 402 aa5.61□□□□□ -1.51
SNF7YLR025W YNL217WP40152 326 aa5.61□□□□□ -1.51
SNF7YLR025W YCH1P42937 148 aa5.61□□□□□ -1.51
SNF7YLR025W PMP3P87284 55 aa5.61□□□□□ -1.51
SNF7YLR025W RUB1Q03919 77 aa5.61□□□□□ -1.51
SNF7YLR025W YLR194CQ05777 254 aa5.61□□□□□ -1.51
SNF7YLR025W YPL257WQ08974 193 aa5.61□□□□□ -1.51
SNF7YLR025W DFM1Q12743 341 aaKnown RBP5.61□□□□□ -1.51
SNF7YLR025W YCL021W-AQ96VH3 125 aa5.61□□□□□ -1.51
SNF7YLR025W RPL2AP0CX45 254 aaKnown RBP5.6□□□□□ -1.51
SNF7YLR025W RPL2BP0CX46 254 aaKnown RBP5.6□□□□□ -1.51
SNF7YLR025W YNL198CP40166 100 aa5.6□□□□□ -1.51
SNF7YLR025W YLR296WQ05898 108 aa5.6□□□□□ -1.51
SNF7YLR025W YKL023C-AQ2V2P3 75 aa5.6□□□□□ -1.51
SNF7YLR025W YIL002W-AQ3E7Z5 69 aa5.6□□□□□ -1.51
SNF7YLR025W YCR075W-AQ3E830 75 aa5.6□□□□□ -1.51
SNF7YLR025W TRP1P00912 224 aa5.59□□□□□ -1.51
SNF7YLR025W RPS11AP0CX47 156 aaKnown RBP5.59□□□□□ -1.51
SNF7YLR025W RPS11BP0CX48 156 aaKnown RBP5.59□□□□□ -1.51
SNF7YLR025W PEX17P40155 199 aa5.59□□□□□ -1.51
SNF7YLR025W YIL059CP40520 121 aa5.59□□□□□ -1.51
SNF7YLR025W AGE2P40529 298 aa5.59□□□□□ -1.51
SNF7YLR025W YFR057WP43625 151 aa5.59□□□□□ -1.51
SNF7YLR025W YJR146WP47174 117 aa5.59□□□□□ -1.51
SNF7YLR025W ADH1P00330 348 aaKnown RBP5.58□□□□□ -1.52
SNF7YLR025W RPS8AP0CX39 200 aaKnown RBP5.58□□□□□ -1.52
SNF7YLR025W RPS8BP0CX40 200 aaKnown RBP5.58□□□□□ -1.52
SNF7YLR025W RPL18AP0CX49 186 aaKnown RBP5.58□□□□□ -1.52
SNF7YLR025W RPL18BP0CX50 186 aaKnown RBP5.58□□□□□ -1.52
SNF7YLR025W YHR212W-AP0CX91 67 aa5.58□□□□□ -1.52
SNF7YLR025W RPL16AP26784 199 aaKnown RBP5.58□□□□□ -1.52
SNF7YLR025W NHP2P32495 156 aaPredicted RBP5.58□□□□□ -1.52
SNF7YLR025W MPC2P38857 129 aa5.58□□□□□ -1.52
SNF7YLR025W RRT13P40042 185 aa5.58□□□□□ -1.52
SNF7YLR025W YER085CP40058 173 aa5.58□□□□□ -1.52
SNF7YLR025W YGL088WP53151 121 aa5.58□□□□□ -1.52
SNF7YLR025W YCL042WP25572 119 aa5.57□□□□□ -1.52
SNF7YLR025W ARO2P28777 376 aaKnown RBP5.57□□□□□ -1.52
SNF7YLR025W YBR144CP34215 104 aa5.57□□□□□ -1.52
SNF7YLR025W POP7P38291 140 aa5.57□□□□□ -1.52
SNF7YLR025W FIP1P45976 327 aa5.57□□□□□ -1.52
SNF7YLR025W YOR097CQ12274 175 aaPredicted RBP5.57□□□□□ -1.52
SNF7YLR025W TAR1Q8TGM6 124 aa5.57□□□□□ -1.52
SNF7YLR025W YBR126W-AQ8TGU7 68 aa5.57□□□□□ -1.52
SNF7YLR025W RPL28P02406 149 aaKnown RBP5.56□□□□□ -1.52
SNF7YLR025W YPT53P36019 220 aa5.56□□□□□ -1.52
SNF7YLR025W CIN5P40917 295 aa5.56□□□□□ -1.52
SNF7YLR025W SHU1P38751 150 aa5.55□□□□□ -1.52
SNF7YLR025W YNR077CP53758 84 aa5.55□□□□□ -1.52
SNF7YLR025W LSM6Q06406 86 aaKnown RBP5.55□□□□□ -1.52
SNF7YLR025W SLO1Q3E784 85 aa5.55□□□□□ -1.52
SNF7YLR025W YGR035W-AQ45U48 73 aa5.55□□□□□ -1.52
SNF7YLR025W TRA1P38811 3744 aa5.54□□□□□ -1.52
SNF7YLR025W YEL067CP39978 195 aa5.54□□□□□ -1.52
SNF7YLR025W SCW10Q04951 389 aa5.54□□□□□ -1.52
SNF7YLR025W YDL022C-AP0C5L6 82 aa5.53□□□□□ -1.52
SNF7YLR025W YFR035CP43608 114 aa5.53□□□□□ -1.52
SNF7YLR025W YNL162W-AQ3E7A8 72 aa5.53□□□□□ -1.52
SNF7YLR025W YER175W-AQ8TGU4 54 aa5.53□□□□□ -1.52
SNF7YLR025W QCR8P08525 94 aa5.52□□□□□ -1.53
SNF7YLR025W UGX2P32772 223 aa5.52□□□□□ -1.53
SNF7YLR025W MID2P36027 376 aa5.52□□□□□ -1.53
SNF7YLR025W YEL008WP40001 126 aa5.52□□□□□ -1.53
SNF7YLR025W VTC1P40046 129 aaRIP-Chip data5.52□□□□□ -1.53not detected
SNF7YLR025W YPS5P53057 165 aa5.52□□□□□ -1.53
SNF7YLR025W MSA1Q08471 629 aa5.52□□□□□ -1.53
SNF7YLR025W PPT2Q12036 173 aa5.52□□□□□ -1.53
SNF7YLR025W YHR130CP38834 111 aa5.51□□□□□ -1.53
SNF7YLR025W ARC15P40518 154 aaRIP-Chip data5.51□□□□□ -1.53not detected
SNF7YLR025W HPA2Q06592 156 aa5.51□□□□□ -1.53
SNF7YLR025W ATX1P38636 73 aa5.5□□□□□ -1.53
SNF7YLR025W YAR029WP39549 74 aa5.5□□□□□ -1.53
SNF7YLR025W YDR274CP87283 123 aa5.5□□□□□ -1.53
SNF7YLR025W CUP1-1P0CX80 61 aa5.49□□□□□ -1.53
SNF7YLR025W CUP1-2P0CX81 61 aa5.49□□□□□ -1.53
SNF7YLR025W HOT13P36078 116 aa5.49□□□□□ -1.53
SNF7YLR025W UBC5P15732 148 aa5.48□□□□□ -1.53
SNF7YLR025W YCR001WP25347 104 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 142.6 ms