RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W ERV14P53173 138 aa1.56□□□□□ -2.16
NUP100YKL068W GPI19Q04082 140 aa1.56□□□□□ -2.16
NUP100YKL068W SWC7Q06707 132 aa1.56□□□□□ -2.16
NUP100YKL068W YOS1Q3E834 85 aa1.56□□□□□ -2.16
NUP100YKL068W HSP26P15992 214 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
NUP100YKL068W IPT1P38954 527 aa1.56□□□□□ -2.16
NUP100YKL068W PAU21P0CE86 164 aa1.55□□□□□ -2.16
NUP100YKL068W PAU22P0CE87 164 aa1.55□□□□□ -2.16
NUP100YKL068W TDA2P40045 126 aa1.55□□□□□ -2.16
NUP100YKL068W YER187WP40102 141 aa1.55□□□□□ -2.16
NUP100YKL068W PEP8P40335 379 aa1.55□□□□□ -2.16
NUP100YKL068W BRP1P53194 125 aa1.55□□□□□ -2.16
NUP100YKL068W NMA1Q06178 401 aaKnown RBP1.55□□□□□ -2.16
NUP100YKL068W YPR153WQ06537 140 aa1.55□□□□□ -2.16
NUP100YKL068W RDS3Q06835 107 aaPredicted RBP1.55□□□□□ -2.16
NUP100YKL068W COX8P04039 78 aa1.55□□□□□ -2.16
NUP100YKL068W HMRA1P0CY11 126 aa1.55□□□□□ -2.16
NUP100YKL068W YHL018WP38744 120 aaPredicted RBP1.55□□□□□ -2.16
NUP100YKL068W RPL13BP40212 199 aaKnown RBP1.55□□□□□ -2.16
NUP100YKL068W CUE4Q04201 117 aaPredicted RBP1.55□□□□□ -2.16
NUP100YKL068W FIT2Q08906 153 aa1.55□□□□□ -2.16
NUP100YKL068W YDL157CQ12082 118 aa1.55□□□□□ -2.16
NUP100YKL068W YDR029WQ12111 104 aa1.55□□□□□ -2.16
NUP100YKL068W MRPL44P19956 98 aa1.54□□□□□ -2.16
NUP100YKL068W GTT1P40582 234 aa1.54□□□□□ -2.16
NUP100YKL068W MIX14Q04341 121 aa1.54□□□□□ -2.16
NUP100YKL068W MDM35O60200 86 aa1.54□□□□□ -2.16
NUP100YKL068W YGL010WP25338 174 aa1.54□□□□□ -2.16
NUP100YKL068W DCV1P43595 202 aa1.54□□□□□ -2.16
NUP100YKL068W HUR1P45820 110 aa1.54□□□□□ -2.16
NUP100YKL068W YJR146WP47174 117 aa1.54□□□□□ -2.16
NUP100YKL068W YDR114CQ04597 100 aa1.54□□□□□ -2.16
NUP100YKL068W ELP6Q04868 273 aa1.54□□□□□ -2.16
NUP100YKL068W CMC4Q3E7A9 73 aa1.54□□□□□ -2.16
NUP100YKL068W SEC11P15367 167 aa1.53□□□□□ -2.16
NUP100YKL068W STF2P16965 84 aa1.53□□□□□ -2.16
NUP100YKL068W HRT1Q08273 121 aa1.53□□□□□ -2.16
NUP100YKL068W HSP150P32478 413 aa1.53□□□□□ -2.16
NUP100YKL068W UTR5P32630 166 aa1.53□□□□□ -2.16
NUP100YKL068W MRPL11P36521 249 aaPredicted RBP1.53□□□□□ -2.16
NUP100YKL068W YBR209WP38311 105 aa1.53□□□□□ -2.16
NUP100YKL068W PAU12P53343 120 aa1.53□□□□□ -2.16
NUP100YKL068W SEN15Q04675 128 aa1.53□□□□□ -2.16
NUP100YKL068W AVO2Q04749 426 aa1.53□□□□□ -2.16
NUP100YKL068W RRT15Q3E811 62 aa1.53□□□□□ -2.16
NUP100YKL068W Q0297Q9ZZV8 51 aa1.53□□□□□ -2.16
NUP100YKL068W RTC6O14464 93 aa1.53□□□□□ -2.17
NUP100YKL068W KRE1P17260 313 aa1.53□□□□□ -2.17
NUP100YKL068W YKR045CP36138 183 aa1.53□□□□□ -2.17
NUP100YKL068W YJL197C-AP0C5P0 93 aa1.52□□□□□ -2.17
NUP100YKL068W SRB6P32570 121 aa1.52□□□□□ -2.17
NUP100YKL068W HPA3P39979 161 aa1.52□□□□□ -2.17
NUP100YKL068W MSL1P40567 111 aaPredicted RBP1.52□□□□□ -2.17
NUP100YKL068W YIR020CP40575 100 aa1.52□□□□□ -2.17
NUP100YKL068W YFL051CP43552 160 aa1.52□□□□□ -2.17
NUP100YKL068W YLR296WQ05898 108 aa1.52□□□□□ -2.17
NUP100YKL068W GPI11Q06636 219 aa1.52□□□□□ -2.17
NUP100YKL068W YPL261CQ08976 102 aa1.52□□□□□ -2.17
NUP100YKL068W COA6Q3E846 104 aa1.52□□□□□ -2.17
NUP100YKL068W SOD1P00445 154 aaKnown RBP1.52□□□□□ -2.17
NUP100YKL068W RPL26AP05743 127 aaKnown RBP1.52□□□□□ -2.17
NUP100YKL068W PAU2P32612 120 aa1.52□□□□□ -2.17
NUP100YKL068W MRPS9P38120 278 aa1.52□□□□□ -2.17
NUP100YKL068W YEL014CP39999 101 aa1.52□□□□□ -2.17
NUP100YKL068W EMC5P40540 141 aa1.52□□□□□ -2.17
NUP100YKL068W RPL26BP53221 127 aaKnown RBP1.52□□□□□ -2.17
NUP100YKL068W YPL067CQ02754 198 aa1.52□□□□□ -2.17
NUP100YKL068W FUN14P18411 198 aa1.51□□□□□ -2.17
NUP100YKL068W NAT5Q08689 176 aa1.51□□□□□ -2.17
NUP100YKL068W ECM12O13529 151 aa1.51□□□□□ -2.17
NUP100YKL068W HSP10P38910 106 aa1.51□□□□□ -2.17
NUP100YKL068W RSM19P53733 91 aaPredicted RBP1.51□□□□□ -2.17
NUP100YKL068W DAD4P69851 72 aa1.51□□□□□ -2.17
NUP100YKL068W OST5Q92316 86 aa1.51□□□□□ -2.17
NUP100YKL068W RPS25BP0C0T4 108 aaKnown RBP1.5□□□□□ -2.17
NUP100YKL068W YJL144WP47009 104 aa1.5□□□□□ -2.17
NUP100YKL068W VPS68Q12016 184 aa1.5□□□□□ -2.17
NUP100YKL068W DAD1Q12248 94 aa1.5□□□□□ -2.17
NUP100YKL068W RPS25AQ3E792 108 aaPredicted RBP1.5□□□□□ -2.17
NUP100YKL068W PAU24P38155 120 aa1.5□□□□□ -2.17
NUP100YKL068W POP3P53833 195 aaPredicted RBP1.5□□□□□ -2.17
NUP100YKL068W YDR042CQ03205 200 aa1.5□□□□□ -2.17
NUP100YKL068W YHR213WP0CI67 198 aa1.49□□□□□ -2.17
NUP100YKL068W VMA21P41806 77 aa1.49□□□□□ -2.17
NUP100YKL068W YGL149WP53116 101 aa1.49□□□□□ -2.17
NUP100YKL068W CYT2Q00873 224 aa1.49□□□□□ -2.17
NUP100YKL068W FMT1P32785 401 aa1.49□□□□□ -2.17
NUP100YKL068W YHR022CP38763 256 aa1.49□□□□□ -2.17
NUP100YKL068W SVP26P38869 228 aa1.49□□□□□ -2.17
NUP100YKL068W HYR1P40581 163 aaKnown RBP1.49□□□□□ -2.17
NUP100YKL068W RPL22BP56628 122 aaKnown RBP1.49□□□□□ -2.17
NUP100YKL068W YMR030W-AQ3E760 96 aa1.49□□□□□ -2.17
NUP100YKL068W YMR175W-AQ3E766 64 aa1.49□□□□□ -2.17
NUP100YKL068W AGA2P32781 87 aa1.49□□□□□ -2.17
NUP100YKL068W YIL014C-AQ02598 104 aa1.49□□□□□ -2.17
NUP100YKL068W CYB5P40312 120 aa1.48□□□□□ -2.17
NUP100YKL068W RGM1Q00453 211 aa1.48□□□□□ -2.17
NUP100YKL068W MET31Q03081 177 aa1.48□□□□□ -2.17
NUP100YKL068W PAU19P0CE85 124 aa1.48□□□□□ -2.17
NUP100YKL068W PAU3P25610 124 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms