RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C RPL27AP0C2H6 136 aaKnown RBP2.17□□□□□ -2.06
ATG27YJL178C YHR022CP38763 256 aa2.17□□□□□ -2.06
ATG27YJL178C YHR140WP38842 239 aa2.17□□□□□ -2.06
ATG27YJL178C SNF11P38956 169 aa2.17□□□□□ -2.06
ATG27YJL178C YER135CP40082 130 aa2.17□□□□□ -2.06
ATG27YJL178C SAE3P89114 91 aa2.17□□□□□ -2.06
ATG27YJL178C SPG4Q04438 115 aa2.17□□□□□ -2.06
ATG27YJL178C HOR7Q05827 59 aa2.17□□□□□ -2.06
ATG27YJL178C YPL162CQ12042 273 aa2.17□□□□□ -2.06
ATG27YJL178C YDL085C-AQ3E7B7 68 aaKnown RBP2.17□□□□□ -2.06
ATG27YJL178C YDL022C-AP0C5L6 82 aa2.16□□□□□ -2.06
ATG27YJL178C YCR023CP25351 611 aa2.16□□□□□ -2.06
ATG27YJL178C UTR5P32630 166 aa2.16□□□□□ -2.06
ATG27YJL178C EDC2P40023 145 aaPredicted RBP2.16□□□□□ -2.06
ATG27YJL178C YER076CP40049 302 aa2.16□□□□□ -2.06
ATG27YJL178C YNL194CP40169 301 aa2.16□□□□□ -2.06
ATG27YJL178C MSL1P40567 111 aaPredicted RBP2.16□□□□□ -2.06
ATG27YJL178C MRPL49P40858 161 aaPredicted RBP2.16□□□□□ -2.06
ATG27YJL178C YIP3P53633 176 aa2.16□□□□□ -2.06
ATG27YJL178C YDR042CQ03205 200 aa2.16□□□□□ -2.06
ATG27YJL178C VPS71Q03433 280 aa2.16□□□□□ -2.06
ATG27YJL178C YEL067CP39978 195 aa2.15□□□□□ -2.07
ATG27YJL178C MIC26P50087 233 aa2.15□□□□□ -2.07
ATG27YJL178C MGR2Q02889 113 aa2.15□□□□□ -2.07
ATG27YJL178C UPS3Q04006 179 aa2.15□□□□□ -2.07
ATG27YJL178C GRH1Q04410 372 aaKnown RBP2.15□□□□□ -2.07
ATG27YJL178C CNL1Q06333 122 aa2.15□□□□□ -2.07
ATG27YJL178C PAU23Q07987 124 aa2.15□□□□□ -2.07
ATG27YJL178C DGA1Q08650 418 aa2.15□□□□□ -2.07
ATG27YJL178C PAU17Q12370 124 aa2.15□□□□□ -2.07
ATG27YJL178C YBR200W-AQ3E755 54 aa2.15□□□□□ -2.07
ATG27YJL178C YAL063C-AQ3E791 96 aa2.15□□□□□ -2.07
ATG27YJL178C VAR1P02381 398 aa2.14□□□□□ -2.07
ATG27YJL178C PFY1P07274 126 aa2.14□□□□□ -2.07
ATG27YJL178C RPL31AP0C2H8 113 aaKnown RBP2.14□□□□□ -2.07
ATG27YJL178C RPL16BP26785 198 aaKnown RBP2.14□□□□□ -2.07
ATG27YJL178C YKR070WP36151 352 aaKnown RBP2.14□□□□□ -2.07
ATG27YJL178C AIM29P36154 155 aa2.14□□□□□ -2.07
ATG27YJL178C GLC8P41818 229 aa2.14□□□□□ -2.07
ATG27YJL178C YDR366CP87287 132 aa2.14□□□□□ -2.07
ATG27YJL178C YMR103CQ04436 120 aa2.14□□□□□ -2.07
ATG27YJL178C FCF1Q05498 189 aaPredicted RBP2.14□□□□□ -2.07
ATG27YJL178C CCW12Q12127 133 aa2.14□□□□□ -2.07
ATG27YJL178C MRPL23Q12487 163 aaPredicted RBP2.14□□□□□ -2.07
ATG27YJL178C COA3Q3E7B2 85 aa2.14□□□□□ -2.07
ATG27YJL178C YNL146C-AQ3E7Z1 64 aa2.14□□□□□ -2.07
ATG27YJL178C CCW14O13547 238 aa2.13□□□□□ -2.07
ATG27YJL178C RPL27BP0C2H7 136 aaKnown RBP2.13□□□□□ -2.07
ATG27YJL178C YHR212W-AP0CX91 67 aa2.13□□□□□ -2.07
ATG27YJL178C HMRA2P0CY13 119 aa2.13□□□□□ -2.07
ATG27YJL178C HAP3P13434 144 aa2.13□□□□□ -2.07
ATG27YJL178C VTC1P40046 129 aaRIP-Chip data2.13□□□□□ -2.07not detected
ATG27YJL178C AGE2P40529 298 aa2.13□□□□□ -2.07
ATG27YJL178C COX16P47081 118 aa2.13□□□□□ -2.07
ATG27YJL178C YNR077CP53758 84 aa2.13□□□□□ -2.07
ATG27YJL178C MRPS8Q03799 155 aa2.13□□□□□ -2.07
ATG27YJL178C TVP18Q04767 167 aa2.13□□□□□ -2.07
ATG27YJL178C MSA1Q08471 629 aa2.13□□□□□ -2.07
ATG27YJL178C YLR050CQ12155 161 aaKnown RBP2.13□□□□□ -2.07
ATG27YJL178C Q0255P03881 472 aa2.12□□□□□ -2.07
ATG27YJL178C YPR170W-BP0C5R9 85 aa2.12□□□□□ -2.07
ATG27YJL178C YCL042WP25572 119 aa2.12□□□□□ -2.07
ATG27YJL178C APS1P35181 156 aa2.12□□□□□ -2.07
ATG27YJL178C YKL070WP36087 169 aa2.12□□□□□ -2.07
ATG27YJL178C ECM33P38248 429 aaKnown RBP2.12□□□□□ -2.07
ATG27YJL178C TOS6P48560 102 aa2.12□□□□□ -2.07
ATG27YJL178C YGL088WP53151 121 aa2.12□□□□□ -2.07
ATG27YJL178C AIM34Q03673 198 aa2.12□□□□□ -2.07
ATG27YJL178C RRG8Q06109 277 aa2.12□□□□□ -2.07
ATG27YJL178C YLR042CQ07990 161 aa2.12□□□□□ -2.07
ATG27YJL178C PRM3Q08931 133 aa2.12□□□□□ -2.07
ATG27YJL178C MBF1O14467 151 aaKnown RBP2.11□□□□□ -2.07
ATG27YJL178C YBL081WP38180 368 aaKnown RBP2.11□□□□□ -2.07
ATG27YJL178C YNL198CP40166 100 aa2.11□□□□□ -2.07
ATG27YJL178C DCV1P43595 202 aa2.11□□□□□ -2.07
ATG27YJL178C YJR146WP47174 117 aa2.11□□□□□ -2.07
ATG27YJL178C CWC27Q02770 301 aa2.11□□□□□ -2.07
ATG27YJL178C YPL261CQ08976 102 aa2.11□□□□□ -2.07
ATG27YJL178C HTL1Q9URQ5 78 aa2.11□□□□□ -2.07
ATG27YJL178C ATP15P21306 62 aa2.1□□□□□ -2.07
ATG27YJL178C YKL044WP36092 106 aa2.1□□□□□ -2.07
ATG27YJL178C YKR041WP36134 250 aa2.1□□□□□ -2.07
ATG27YJL178C YPL073CP40323 161 aa2.1□□□□□ -2.07
ATG27YJL178C CIN5P40917 295 aa2.1□□□□□ -2.07
ATG27YJL178C YNL190WP53872 204 aa2.1□□□□□ -2.07
ATG27YJL178C AIM11P87275 137 aa2.1□□□□□ -2.07
ATG27YJL178C YLR363W-AQ3E747 85 aa2.1□□□□□ -2.07
ATG27YJL178C YOR008C-AQ3E7B9 74 aa2.1□□□□□ -2.07
ATG27YJL178C NUM1Q00402 2748 aa2.1□□□□□ -2.07
ATG27YJL178C NRG2P38082 220 aa2.09□□□□□ -2.07
ATG27YJL178C YBR209WP38311 105 aa2.09□□□□□ -2.07
ATG27YJL178C RPF1P38805 295 aaKnown RBP2.09□□□□□ -2.07
ATG27YJL178C YNL217WP40152 326 aa2.09□□□□□ -2.07
ATG27YJL178C ALG13P53178 202 aa2.09□□□□□ -2.07
ATG27YJL178C MRPS12P53732 153 aa2.09□□□□□ -2.07
ATG27YJL178C RPL28P02406 149 aaKnown RBP2.08□□□□□ -2.08
ATG27YJL178C RPL2AP0CX45 254 aaKnown RBP2.08□□□□□ -2.08
ATG27YJL178C RPL2BP0CX46 254 aaKnown RBP2.08□□□□□ -2.08
ATG27YJL178C RPS11AP0CX47 156 aaKnown RBP2.08□□□□□ -2.08
ATG27YJL178C RPS11BP0CX48 156 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms