RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI3YJL176C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SWI3YJL176C ANB1P19211 157 aa3.26□□□□□ -1.89
SWI3YJL176C URM1P40554 99 aaPredicted RBP3.26□□□□□ -1.89
SWI3YJL176C ERV14P53173 138 aa3.26□□□□□ -1.89
SWI3YJL176C MED7Q08278 222 aa3.26□□□□□ -1.89
SWI3YJL176C GSP1P32835 219 aaKnown RBP3.25□□□□□ -1.89
SWI3YJL176C GSP2P32836 220 aaKnown RBP3.25□□□□□ -1.89
SWI3YJL176C PKR1Q03880 122 aaKnown RBP3.25□□□□□ -1.89
SWI3YJL176C HTL1Q9URQ5 78 aa3.25□□□□□ -1.89
SWI3YJL176C YER134CP40081 178 aa3.25□□□□□ -1.89
SWI3YJL176C YDR115WQ04598 105 aa3.25□□□□□ -1.89
SWI3YJL176C RRT15Q3E811 62 aa3.25□□□□□ -1.89
SWI3YJL176C YCL021W-AQ96VH3 125 aa3.25□□□□□ -1.89
SWI3YJL176C GAT4P40569 121 aa3.24□□□□□ -1.89
SWI3YJL176C HMRA2P0CY13 119 aa3.24□□□□□ -1.89
SWI3YJL176C YER085CP40058 173 aa3.24□□□□□ -1.89
SWI3YJL176C OST3P48439 350 aa3.24□□□□□ -1.89
SWI3YJL176C MRPL33P20084 86 aa3.23□□□□□ -1.89
SWI3YJL176C YAR029WP39549 74 aa3.23□□□□□ -1.89
SWI3YJL176C YEL008WP40001 126 aa3.23□□□□□ -1.89
SWI3YJL176C YDR042CQ03205 200 aa3.23□□□□□ -1.89
SWI3YJL176C ENV10Q99382 181 aa3.22□□□□□ -1.89
SWI3YJL176C YAR023CD6VPM8 179 aa3.22□□□□□ -1.89
SWI3YJL176C POP3P53833 195 aaPredicted RBP3.22□□□□□ -1.89
SWI3YJL176C BET5Q03630 159 aa3.22□□□□□ -1.89
SWI3YJL176C COA3Q3E7B2 85 aa3.22□□□□□ -1.89
SWI3YJL176C RPL27BP0C2H7 136 aaKnown RBP3.21□□□□□ -1.89
SWI3YJL176C RPL31AP0C2H8 113 aaKnown RBP3.21□□□□□ -1.89
SWI3YJL176C YLR112WQ12130 139 aa3.21□□□□□ -1.89
SWI3YJL176C YPL229WQ99395 206 aa3.21□□□□□ -1.89
SWI3YJL176C SSS1P35179 80 aa3.21□□□□□ -1.9
SWI3YJL176C RPC10P40422 70 aa3.2□□□□□ -1.9
SWI3YJL176C CUE4Q04201 117 aaPredicted RBP3.2□□□□□ -1.9
SWI3YJL176C LCL2Q08045 131 aa3.2□□□□□ -1.9
SWI3YJL176C TPT1Q12272 230 aaKnown RBP3.2□□□□□ -1.9
SWI3YJL176C APS1P35181 156 aa3.2□□□□□ -1.9
SWI3YJL176C YBR219CP38317 127 aa3.2□□□□□ -1.9
SWI3YJL176C YAL064WP39711 94 aa3.2□□□□□ -1.9
SWI3YJL176C GIS2P53849 153 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9 RIP-Chip
SWI3YJL176C ATP16Q12165 160 aa3.2□□□□□ -1.9
SWI3YJL176C CMC2Q3E7A4 109 aa3.2□□□□□ -1.9
SWI3YJL176C MRP10O75012 95 aa3.19□□□□□ -1.9
SWI3YJL176C YDR034C-AP0C289 58 aa3.19□□□□□ -1.9
SWI3YJL176C FYV4P38783 130 aaPredicted RBP3.19□□□□□ -1.9
SWI3YJL176C YMR103CQ04436 120 aa3.19□□□□□ -1.9
SWI3YJL176C YMR175W-AQ3E766 64 aa3.19□□□□□ -1.9
SWI3YJL176C CIN5P40917 295 aa3.19□□□□□ -1.9
SWI3YJL176C YMR295CQ03559 197 aa3.19□□□□□ -1.9
SWI3YJL176C ATP15P21306 62 aa3.18□□□□□ -1.9
SWI3YJL176C YKL070WP36087 169 aa3.18□□□□□ -1.9
SWI3YJL176C MRPL11P36521 249 aaPredicted RBP3.18□□□□□ -1.9
SWI3YJL176C YBL081WP38180 368 aaKnown RBP3.18□□□□□ -1.9
SWI3YJL176C DFM1Q12743 341 aaKnown RBP3.18□□□□□ -1.9
SWI3YJL176C PAU16P35994 123 aa3.18□□□□□ -1.9
SWI3YJL176C YLR050CQ12155 161 aaKnown RBP3.18□□□□□ -1.9
SWI3YJL176C YLR194CQ05777 254 aa3.17□□□□□ -1.9
SWI3YJL176C CNL1Q06333 122 aa3.17□□□□□ -1.9
SWI3YJL176C YDR029WQ12111 104 aa3.17□□□□□ -1.9
SWI3YJL176C COA6Q3E846 104 aa3.17□□□□□ -1.9
SWI3YJL176C YIL134C-AQ45U18 67 aa3.17□□□□□ -1.9
SWI3YJL176C SNA2P56508 79 aa3.17□□□□□ -1.9
SWI3YJL176C SEN15Q04675 128 aa3.17□□□□□ -1.9
SWI3YJL176C SHU1P38751 150 aa3.16□□□□□ -1.9
SWI3YJL176C VTC1P40046 129 aaRIP-Chip data3.16□□□□□ -1.9not detected
SWI3YJL176C AIM11P87275 137 aa3.16□□□□□ -1.9
SWI3YJL176C YPL261CQ08976 102 aa3.16□□□□□ -1.9
SWI3YJL176C PEX17P40155 199 aa3.15□□□□□ -1.9
SWI3YJL176C YDL241WQ07738 123 aa3.15□□□□□ -1.9
SWI3YJL176C PPT2Q12036 173 aa3.15□□□□□ -1.9
SWI3YJL176C YAL065CO13511 128 aa3.15□□□□□ -1.91
SWI3YJL176C RPL32P38061 130 aaKnown RBP3.14□□□□□ -1.91
SWI3YJL176C COX14P39103 70 aa3.14□□□□□ -1.91
SWI3YJL176C RPL18AP0CX49 186 aaKnown RBP3.14□□□□□ -1.91
SWI3YJL176C RPL18BP0CX50 186 aaKnown RBP3.14□□□□□ -1.91
SWI3YJL176C TOA2P32774 122 aa3.14□□□□□ -1.91
SWI3YJL176C HAC1P41546 238 aa3.14□□□□□ -1.91
SWI3YJL176C SCS22Q6Q595 175 aa3.14□□□□□ -1.91
SWI3YJL176C YKL044WP36092 106 aa3.13□□□□□ -1.91
SWI3YJL176C YKR041WP36134 250 aa3.13□□□□□ -1.91
SWI3YJL176C ADH1P00330 348 aaKnown RBP3.12□□□□□ -1.91
SWI3YJL176C QCR8P08525 94 aa3.12□□□□□ -1.91
SWI3YJL176C AQY2P0CD90 149 aa3.12□□□□□ -1.91
SWI3YJL176C SEC11P15367 167 aa3.12□□□□□ -1.91
SWI3YJL176C YDL022C-AP0C5L6 82 aa3.12□□□□□ -1.91
SWI3YJL176C RPF1P38805 295 aaKnown RBP3.12□□□□□ -1.91
SWI3YJL176C OXA1P39952 402 aa3.12□□□□□ -1.91
SWI3YJL176C MSL1P40567 111 aaPredicted RBP3.12□□□□□ -1.91
SWI3YJL176C YGL230CP53074 147 aa3.12□□□□□ -1.91
SWI3YJL176C MET32Q12041 191 aa3.12□□□□□ -1.91
SWI3YJL176C HAP3P13434 144 aa3.11□□□□□ -1.91
SWI3YJL176C MRPL44P19956 98 aa3.11□□□□□ -1.91
SWI3YJL176C SMP1P38128 452 aa3.11□□□□□ -1.91
SWI3YJL176C PEX22P39718 180 aa3.11□□□□□ -1.91
SWI3YJL176C YPL073CP40323 161 aa3.11□□□□□ -1.91
SWI3YJL176C CGR1P53188 120 aa3.11□□□□□ -1.91
SWI3YJL176C ABF2Q02486 183 aa3.11□□□□□ -1.91
SWI3YJL176C LCL1Q02786 101 aa3.11□□□□□ -1.91
SWI3YJL176C YGL041C-BQ3E750 60 aa3.11□□□□□ -1.91
SWI3YJL176C YLR307C-AQ3E825 87 aa3.11□□□□□ -1.91
SWI3YJL176C ECM12O13529 151 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms