RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W YGL230CP53074 147 aa3.74□□□□□ -1.81
RPB4YJL140W TVP18Q04767 167 aa3.74□□□□□ -1.81
RPB4YJL140W PFY1P07274 126 aa3.73□□□□□ -1.81
RPB4YJL140W ATP5P09457 212 aa3.73□□□□□ -1.81
RPB4YJL140W HMRA2P0CY13 119 aa3.73□□□□□ -1.81
RPB4YJL140W MSL1P40567 111 aaPredicted RBP3.73□□□□□ -1.81
RPB4YJL140W COX12Q01519 83 aa3.73□□□□□ -1.81
RPB4YJL140W YDR042CQ03205 200 aa3.73□□□□□ -1.81
RPB4YJL140W FCF1Q05498 189 aaPredicted RBP3.73□□□□□ -1.81
RPB4YJL140W RDS3Q06835 107 aaPredicted RBP3.73□□□□□ -1.81
RPB4YJL140W YLR042CQ07990 161 aa3.73□□□□□ -1.81
RPB4YJL140W RRT13P40042 185 aa3.72□□□□□ -1.81
RPB4YJL140W VHS2P40463 436 aa3.72□□□□□ -1.81
RPB4YJL140W YDR366CP87287 132 aa3.72□□□□□ -1.81
RPB4YJL140W SAE3P89114 91 aa3.72□□□□□ -1.81
RPB4YJL140W AIM34Q03673 198 aa3.72□□□□□ -1.81
RPB4YJL140W RPL27BP0C2H7 136 aaKnown RBP3.71□□□□□ -1.82
RPB4YJL140W RPL2AP0CX45 254 aaKnown RBP3.71□□□□□ -1.82
RPB4YJL140W RPL2BP0CX46 254 aaKnown RBP3.71□□□□□ -1.82
RPB4YJL140W RPS11AP0CX47 156 aaKnown RBP3.71□□□□□ -1.82
RPB4YJL140W RPS11BP0CX48 156 aaKnown RBP3.71□□□□□ -1.82
RPB4YJL140W YMR103CQ04436 120 aa3.71□□□□□ -1.82
RPB4YJL140W YLR050CQ12155 161 aaKnown RBP3.71□□□□□ -1.82
RPB4YJL140W COA3Q3E7B2 85 aa3.71□□□□□ -1.82
RPB4YJL140W YDL085C-AQ3E7B7 68 aaKnown RBP3.71□□□□□ -1.82
RPB4YJL140W APS1P35181 156 aa3.7□□□□□ -1.82
RPB4YJL140W DCV1P43595 202 aa3.7□□□□□ -1.82
RPB4YJL140W TOS6P48560 102 aa3.7□□□□□ -1.82
RPB4YJL140W MHR1Q06630 226 aa3.7□□□□□ -1.82
RPB4YJL140W DGA1Q08650 418 aa3.7□□□□□ -1.82
RPB4YJL140W DFM1Q12743 341 aaKnown RBP3.7□□□□□ -1.82
RPB4YJL140W HTL1Q9URQ5 78 aa3.7□□□□□ -1.82
RPB4YJL140W RPL16AP26784 199 aaKnown RBP3.69□□□□□ -1.82
RPB4YJL140W YPS5P53057 165 aa3.69□□□□□ -1.82
RPB4YJL140W YGL088WP53151 121 aa3.69□□□□□ -1.82
RPB4YJL140W BET5Q03630 159 aa3.69□□□□□ -1.82
RPB4YJL140W PAU23Q07987 124 aa3.69□□□□□ -1.82
RPB4YJL140W PAU17Q12370 124 aa3.69□□□□□ -1.82
RPB4YJL140W YDL022C-AP0C5L6 82 aa3.68□□□□□ -1.82
RPB4YJL140W YKL070WP36087 169 aa3.68□□□□□ -1.82
RPB4YJL140W YKR070WP36151 352 aaKnown RBP3.68□□□□□ -1.82
RPB4YJL140W YBR209WP38311 105 aa3.68□□□□□ -1.82
RPB4YJL140W YNL217WP40152 326 aa3.68□□□□□ -1.82
RPB4YJL140W GLC8P41818 229 aa3.68□□□□□ -1.82
RPB4YJL140W YJR146WP47174 117 aa3.68□□□□□ -1.82
RPB4YJL140W YCR001WP25347 104 aa3.67□□□□□ -1.82
RPB4YJL140W YCR007CP25354 239 aa3.67□□□□□ -1.82
RPB4YJL140W YEL067CP39978 195 aa3.67□□□□□ -1.82
RPB4YJL140W YOR008C-AQ3E7B9 74 aa3.67□□□□□ -1.82
RPB4YJL140W YKL044WP36092 106 aa3.66□□□□□ -1.82
RPB4YJL140W YCH1P42937 148 aa3.66□□□□□ -1.82
RPB4YJL140W HAL1Q01766 294 aa3.66□□□□□ -1.82
RPB4YJL140W ADH2P00331 348 aaKnown RBP3.65□□□□□ -1.83
RPB4YJL140W RPL31AP0C2H8 113 aaKnown RBP3.65□□□□□ -1.83
RPB4YJL140W ATP15P21306 62 aa3.65□□□□□ -1.83
RPB4YJL140W AIM29P36154 155 aa3.65□□□□□ -1.83
RPB4YJL140W RPL32P38061 130 aaKnown RBP3.65□□□□□ -1.83
RPB4YJL140W YPL073CP40323 161 aa3.65□□□□□ -1.83
RPB4YJL140W YIL059CP40520 121 aa3.65□□□□□ -1.83
RPB4YJL140W RPR2P40571 144 aa3.65□□□□□ -1.83
RPB4YJL140W AIM11P87275 137 aa3.65□□□□□ -1.83
RPB4YJL140W CWC27Q02770 301 aa3.65□□□□□ -1.83
RPB4YJL140W YPL261CQ08976 102 aa3.65□□□□□ -1.83
RPB4YJL140W YBR126W-AQ8TGU7 68 aa3.65□□□□□ -1.83
RPB4YJL140W HAP3P13434 144 aa3.64□□□□□ -1.83
RPB4YJL140W UBC5P15732 148 aa3.64□□□□□ -1.83
RPB4YJL140W VTC1P40046 129 aaRIP-Chip data3.64□□□□□ -1.83not detected
RPB4YJL140W SGF11Q03067 99 aa3.64□□□□□ -1.83
RPB4YJL140W YKR041WP36134 250 aa3.63□□□□□ -1.83
RPB4YJL140W RPF1P38805 295 aaKnown RBP3.63□□□□□ -1.83
RPB4YJL140W YEL008WP40001 126 aa3.63□□□□□ -1.83
RPB4YJL140W YER085CP40058 173 aa3.63□□□□□ -1.83
RPB4YJL140W GAT4P40569 121 aa3.63□□□□□ -1.83
RPB4YJL140W YNR077CP53758 84 aa3.63□□□□□ -1.83
RPB4YJL140W PMP3P87284 55 aa3.63□□□□□ -1.83
RPB4YJL140W YLR363W-AQ3E747 85 aa3.63□□□□□ -1.83
RPB4YJL140W TRP1P00912 224 aa3.62□□□□□ -1.83
RPB4YJL140W CIN5P40917 295 aa3.62□□□□□ -1.83
RPB4YJL140W YFR057WP43625 151 aa3.62□□□□□ -1.83
RPB4YJL140W YCR075W-AQ3E830 75 aa3.62□□□□□ -1.83
RPB4YJL140W RPL28P02406 149 aaKnown RBP3.61□□□□□ -1.83
RPB4YJL140W RPL18AP0CX49 186 aaKnown RBP3.61□□□□□ -1.83
RPB4YJL140W RPL18BP0CX50 186 aaKnown RBP3.61□□□□□ -1.83
RPB4YJL140W OXA1P39952 402 aa3.61□□□□□ -1.83
RPB4YJL140W ARC15P40518 154 aaRIP-Chip data3.61□□□□□ -1.83not detected
RPB4YJL140W MRP49P32388 137 aa3.6□□□□□ -1.83
RPB4YJL140W YBR219CP38317 127 aa3.6□□□□□ -1.83
RPB4YJL140W YNL190WP53872 204 aa3.6□□□□□ -1.83
RPB4YJL140W VAM10Q08474 114 aa3.6□□□□□ -1.83
RPB4YJL140W YGR240C-AQ3E786 66 aa3.6□□□□□ -1.83
RPB4YJL140W YCL021W-AQ96VH3 125 aa3.6□□□□□ -1.83
RPB4YJL140W MBF1O14467 151 aaKnown RBP3.59□□□□□ -1.83
RPB4YJL140W YPR170W-BP0C5R9 85 aa3.59□□□□□ -1.83
RPB4YJL140W MRPS12P53732 153 aa3.59□□□□□ -1.83
RPB4YJL140W ELC1Q03071 99 aa3.59□□□□□ -1.83
RPB4YJL140W YLR194CQ05777 254 aa3.59□□□□□ -1.83
RPB4YJL140W MID2P36027 376 aa3.58□□□□□ -1.84
RPB4YJL140W SHU1P38751 150 aa3.58□□□□□ -1.84
RPB4YJL140W YNL198CP40166 100 aa3.58□□□□□ -1.84
RPB4YJL140W YMR295CQ03559 197 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 122.8 ms