RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C YHL018WP38744 120 aaPredicted RBP1.92□□□□□ -2.1
TCD1YHR003C YFR035CP43608 114 aa1.92□□□□□ -2.1
TCD1YHR003C SCP1Q08873 200 aa1.92□□□□□ -2.1
TCD1YHR003C YCR075W-AQ3E830 75 aa1.92□□□□□ -2.1
TCD1YHR003C COX8P04039 78 aa1.91□□□□□ -2.1
TCD1YHR003C RPS25BP0C0T4 108 aaKnown RBP1.91□□□□□ -2.1
TCD1YHR003C AGA2P32781 87 aa1.91□□□□□ -2.1
TCD1YHR003C NHP10Q03435 203 aa1.91□□□□□ -2.1
TCD1YHR003C YPR195CQ06594 109 aa1.91□□□□□ -2.1
TCD1YHR003C NAT5Q08689 176 aa1.91□□□□□ -2.1
TCD1YHR003C YMR030W-AQ3E760 96 aa1.91□□□□□ -2.1
TCD1YHR003C RPS25AQ3E792 108 aaPredicted RBP1.91□□□□□ -2.1
TCD1YHR003C YGL041W-AP0C5N3 154 aa1.9□□□□□ -2.11
TCD1YHR003C PRE1P22141 198 aaKnown RBP1.9□□□□□ -2.11
TCD1YHR003C YHR130CP38834 111 aa1.9□□□□□ -2.11
TCD1YHR003C HPA3P39979 161 aa1.9□□□□□ -2.11
TCD1YHR003C YGL149WP53116 101 aa1.9□□□□□ -2.11
TCD1YHR003C YMR090WQ04304 227 aaKnown RBP1.9□□□□□ -2.11
TCD1YHR003C YDL157CQ12082 118 aa1.9□□□□□ -2.11
TCD1YHR003C YLR365WQ7LIF2 110 aa1.9□□□□□ -2.11
TCD1YHR003C UBR1P19812 1950 aa1.9□□□□□ -2.11
TCD1YHR003C MDM35O60200 86 aa1.89□□□□□ -2.11
TCD1YHR003C FPR1P20081 114 aaKnown RBP1.89□□□□□ -2.11
TCD1YHR003C UTR5P32630 166 aa1.89□□□□□ -2.11
TCD1YHR003C ECM31P38122 312 aa1.89□□□□□ -2.11
TCD1YHR003C YHR022CP38763 256 aa1.89□□□□□ -2.11
TCD1YHR003C FIT1Q04433 528 aa1.89□□□□□ -2.11
TCD1YHR003C RDS3Q06835 107 aaPredicted RBP1.89□□□□□ -2.11
TCD1YHR003C FIT2Q08906 153 aa1.89□□□□□ -2.11
TCD1YHR003C EMC6Q12431 108 aa1.89□□□□□ -2.11
TCD1YHR003C YGL194C-AQ2V2P6 80 aa1.89□□□□□ -2.11
TCD1YHR003C COA6Q3E846 104 aa1.89□□□□□ -2.11
TCD1YHR003C MIC10Q96VH5 97 aa1.89□□□□□ -2.11
TCD1YHR003C PAU21P0CE86 164 aa1.88□□□□□ -2.11
TCD1YHR003C PAU22P0CE87 164 aa1.88□□□□□ -2.11
TCD1YHR003C STF2P16965 84 aa1.88□□□□□ -2.11
TCD1YHR003C FUN14P18411 198 aa1.88□□□□□ -2.11
TCD1YHR003C EMP24P32803 203 aaKnown RBP1.88□□□□□ -2.11
TCD1YHR003C SNU13P39990 126 aaKnown RBP1.88□□□□□ -2.11
TCD1YHR003C DCV1P43595 202 aa1.88□□□□□ -2.11
TCD1YHR003C CYT2Q00873 224 aa1.88□□□□□ -2.11
TCD1YHR003C ELP6Q04868 273 aa1.88□□□□□ -2.11
TCD1YHR003C YPR153WQ06537 140 aa1.88□□□□□ -2.11
TCD1YHR003C GTT1P40582 234 aa1.87□□□□□ -2.11
TCD1YHR003C YPL067CQ02754 198 aa1.87□□□□□ -2.11
TCD1YHR003C MET31Q03081 177 aa1.87□□□□□ -2.11
TCD1YHR003C GPI11Q06636 219 aa1.87□□□□□ -2.11
TCD1YHR003C FIT3Q08907 204 aa1.87□□□□□ -2.11
TCD1YHR003C DAD1Q12248 94 aa1.87□□□□□ -2.11
TCD1YHR003C UBC4P15731 148 aa1.86□□□□□ -2.11
TCD1YHR003C YFL051CP43552 160 aa1.86□□□□□ -2.11
TCD1YHR003C YJL144WP47009 104 aa1.86□□□□□ -2.11
TCD1YHR003C PAU12P53343 120 aa1.86□□□□□ -2.11
TCD1YHR003C SML1Q04964 104 aa1.86□□□□□ -2.11
TCD1YHR003C SWC7Q06707 132 aa1.86□□□□□ -2.11
TCD1YHR003C YHR007C-AQ07074 71 aa1.86□□□□□ -2.11
TCD1YHR003C YPL261CQ08976 102 aa1.86□□□□□ -2.11
TCD1YHR003C CMC4Q3E7A9 73 aa1.86□□□□□ -2.11
TCD1YHR003C YOS1Q3E834 85 aa1.86□□□□□ -2.11
TCD1YHR003C MHF1Q3E835 90 aa1.86□□□□□ -2.11
TCD1YHR003C KSH1Q8TGJ3 72 aa1.86□□□□□ -2.11
TCD1YHR003C RPB7P34087 171 aa1.85□□□□□ -2.11
TCD1YHR003C MRPL11P36521 249 aaPredicted RBP1.85□□□□□ -2.11
TCD1YHR003C DSE2P38844 325 aa1.85□□□□□ -2.11
TCD1YHR003C IPT1P38954 527 aa1.85□□□□□ -2.11
TCD1YHR003C YEL014CP39999 101 aa1.85□□□□□ -2.11
TCD1YHR003C SPO73P40031 143 aa1.85□□□□□ -2.11
TCD1YHR003C YER187WP40102 141 aa1.85□□□□□ -2.11
TCD1YHR003C PEP8P40335 379 aa1.85□□□□□ -2.11
TCD1YHR003C HUR1P45820 110 aa1.85□□□□□ -2.11
TCD1YHR003C BRP1P53194 125 aa1.85□□□□□ -2.11
TCD1YHR003C URA2P07259 2214 aaKnown RBP1.85□□□□□ -2.11
TCD1YHR003C FAS1P07149 2051 aaKnown RBP1.84□□□□□ -2.11
TCD1YHR003C RPL36BO14455 100 aaKnown RBP1.84□□□□□ -2.11
TCD1YHR003C RPL36AP05745 100 aaPredicted RBP1.84□□□□□ -2.11
TCD1YHR003C HSP150P32478 413 aa1.84□□□□□ -2.11
TCD1YHR003C PAU2P32612 120 aa1.84□□□□□ -2.11
TCD1YHR003C VMA21P41806 77 aa1.84□□□□□ -2.11
TCD1YHR003C RPL22BP56628 122 aaKnown RBP1.84□□□□□ -2.11
TCD1YHR003C YDR029WQ12111 104 aa1.84□□□□□ -2.11
TCD1YHR003C OST5Q92316 86 aa1.84□□□□□ -2.11
TCD1YHR003C PAU19P0CE85 124 aa1.83□□□□□ -2.12
TCD1YHR003C PAU3P25610 124 aa1.83□□□□□ -2.12
TCD1YHR003C YKR045CP36138 183 aa1.83□□□□□ -2.12
TCD1YHR003C ATG8P38182 117 aaRIP-Chip data1.83□□□□□ -2.12not detected
TCD1YHR003C RPL13BP40212 199 aaKnown RBP1.83□□□□□ -2.12
TCD1YHR003C EMC5P40540 141 aa1.83□□□□□ -2.12
TCD1YHR003C MSL1P40567 111 aaPredicted RBP1.83□□□□□ -2.12
TCD1YHR003C YIL014C-AQ02598 104 aa1.83□□□□□ -2.12
TCD1YHR003C AVO2Q04749 426 aa1.83□□□□□ -2.12
TCD1YHR003C RTC6O14464 93 aa1.82□□□□□ -2.12
TCD1YHR003C HMRA1P0CY11 126 aa1.82□□□□□ -2.12
TCD1YHR003C PAU24P38155 120 aa1.82□□□□□ -2.12
TCD1YHR003C SNN1P48232 102 aa1.82□□□□□ -2.12
TCD1YHR003C YLR194CQ05777 254 aa1.82□□□□□ -2.12
TCD1YHR003C YLR296WQ05898 108 aa1.82□□□□□ -2.12
TCD1YHR003C HPA2Q06592 156 aa1.82□□□□□ -2.12
TCD1YHR003C PCC1Q3E833 88 aa1.82□□□□□ -2.12
TCD1YHR003C YPR096CO13587 100 aa1.81□□□□□ -2.12
TCD1YHR003C ECM12O13529 151 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms