RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W GLO1P50107 326 aa1.92□□□□□ -2.1
SPF1YEL031W YNR077CP53758 84 aa1.92□□□□□ -2.1
SPF1YEL031W PPT2Q12036 173 aa1.92□□□□□ -2.1
SPF1YEL031W YDR381C-AQ3E6R5 114 aa1.92□□□□□ -2.1
SPF1YEL031W YOR020W-AQ3E824 90 aa1.92□□□□□ -2.1
SPF1YEL031W RPL2AP0CX45 254 aaKnown RBP1.92□□□□□ -2.1
SPF1YEL031W RPL2BP0CX46 254 aaKnown RBP1.92□□□□□ -2.1
SPF1YEL031W MXR2P25566 168 aa1.91□□□□□ -2.1
SPF1YEL031W MOH1P38191 138 aa1.91□□□□□ -2.1
SPF1YEL031W YHR022CP38763 256 aa1.91□□□□□ -2.1
SPF1YEL031W YAR029WP39549 74 aa1.91□□□□□ -2.1
SPF1YEL031W CIS3P47001 227 aa1.91□□□□□ -2.1
SPF1YEL031W RPL15BP54780 204 aaPredicted RBP1.91□□□□□ -2.1
SPF1YEL031W YKL183C-AQ3E765 70 aa1.91□□□□□ -2.1
SPF1YEL031W MTC6P38849 526 aa1.91□□□□□ -2.1
SPF1YEL031W KEG1P43614 200 aa1.91□□□□□ -2.1
SPF1YEL031W NCE102Q12207 173 aaRIP-Chip data1.91□□□□□ -2.1not detected
SPF1YEL031W RPS14AP06367 137 aaKnown RBP1.91□□□□□ -2.1
SPF1YEL031W RPS23AP0CX29 145 aaKnown RBP1.91□□□□□ -2.1
SPF1YEL031W RPS23BP0CX30 145 aa1.91□□□□□ -2.1
SPF1YEL031W RPL18AP0CX49 186 aaKnown RBP1.91□□□□□ -2.1
SPF1YEL031W RPL18BP0CX50 186 aaKnown RBP1.91□□□□□ -2.1
SPF1YEL031W MSA2P36157 363 aa1.91□□□□□ -2.1
SPF1YEL031W RPS14BP39516 138 aaKnown RBP1.91□□□□□ -2.1
SPF1YEL031W VPS55P47111 140 aa1.91□□□□□ -2.1
SPF1YEL031W YGR219WP53307 113 aa1.91□□□□□ -2.1
SPF1YEL031W TIM10P87108 93 aa1.91□□□□□ -2.1
SPF1YEL031W RXT3Q07458 294 aa1.91□□□□□ -2.1
SPF1YEL031W IRC23Q08416 157 aa1.91□□□□□ -2.1
SPF1YEL031W YBL112CQ3E7Y4 105 aa1.91□□□□□ -2.1
SPF1YEL031W YHR213WP0CI67 198 aa1.9□□□□□ -2.1
SPF1YEL031W BET1P22804 142 aa1.9□□□□□ -2.1
SPF1YEL031W AGA1P32323 725 aa1.9□□□□□ -2.1
SPF1YEL031W RRT13P40042 185 aa1.9□□□□□ -2.1
SPF1YEL031W YFR057WP43625 151 aa1.9□□□□□ -2.1
SPF1YEL031W SIP18P50263 79 aa1.9□□□□□ -2.1
SPF1YEL031W ERG28P40030 148 aa1.9□□□□□ -2.11
SPF1YEL031W YMR141CP40211 102 aa1.9□□□□□ -2.11
SPF1YEL031W POR2P40478 281 aa1.9□□□□□ -2.11
SPF1YEL031W IMP2P46972 177 aa1.9□□□□□ -2.11
SPF1YEL031W SHU1P38751 150 aa1.9□□□□□ -2.11
SPF1YEL031W VHS2P40463 436 aa1.9□□□□□ -2.11
SPF1YEL031W HAL1Q01766 294 aa1.9□□□□□ -2.11
SPF1YEL031W YNL277W-AQ3E7Z0 62 aa1.9□□□□□ -2.11
SPF1YEL031W DIF1O13577 133 aa1.89□□□□□ -2.11
SPF1YEL031W YER084WP40057 128 aa1.89□□□□□ -2.11
SPF1YEL031W YDL009CQ12210 107 aa1.89□□□□□ -2.11
SPF1YEL031W RPL28P02406 149 aaKnown RBP1.89□□□□□ -2.11
SPF1YEL031W UBC4P15731 148 aa1.89□□□□□ -2.11
SPF1YEL031W PIR5P46999 287 aa1.89□□□□□ -2.11
SPF1YEL031W ALG13P53178 202 aa1.89□□□□□ -2.11
SPF1YEL031W TSC3Q3E790 80 aa1.89□□□□□ -2.11
SPF1YEL031W ATP15P21306 62 aa1.89□□□□□ -2.11
SPF1YEL031W YEL067CP39978 195 aa1.89□□□□□ -2.11
SPF1YEL031W YER187WP40102 141 aa1.89□□□□□ -2.11
SPF1YEL031W HUA1P40325 198 aa1.89□□□□□ -2.11
SPF1YEL031W YLR042CQ07990 161 aa1.89□□□□□ -2.11
SPF1YEL031W YPL229WQ99395 206 aa1.89□□□□□ -2.11
SPF1YEL031W AIM4P38305 123 aaPredicted RBP1.88□□□□□ -2.11
SPF1YEL031W YJR146WP47174 117 aa1.88□□□□□ -2.11
SPF1YEL031W API2Q04413 109 aa1.88□□□□□ -2.11
SPF1YEL031W VTC1P40046 129 aaRIP-Chip data1.88□□□□□ -2.11not detected
SPF1YEL031W MRPL38P35996 138 aaPredicted RBP1.87□□□□□ -2.11
SPF1YEL031W ADH5P38113 351 aaKnown RBP1.87□□□□□ -2.11
SPF1YEL031W YJL027CP47063 138 aaPredicted RBP1.87□□□□□ -2.11
SPF1YEL031W RGM1Q00453 211 aa1.87□□□□□ -2.11
SPF1YEL031W IRC21Q04772 201 aa1.87□□□□□ -2.11
SPF1YEL031W YDR182W-AQ3E796 67 aa1.87□□□□□ -2.11
SPF1YEL031W YJR107C-AP0CT86 78 aa1.87□□□□□ -2.11
SPF1YEL031W MRPS12P53732 153 aa1.87□□□□□ -2.11
SPF1YEL031W YOR314WQ12506 109 aa1.87□□□□□ -2.11
SPF1YEL031W YLR285C-AQ3E771 56 aa1.87□□□□□ -2.11
SPF1YEL031W CCW12Q12127 133 aa1.87□□□□□ -2.11
SPF1YEL031W YKL065W-AQ2V2P2 73 aa1.87□□□□□ -2.11
SPF1YEL031W IES6P32617 166 aa1.86□□□□□ -2.11
SPF1YEL031W RPR2P40571 144 aa1.86□□□□□ -2.11
SPF1YEL031W RNH203Q12338 110 aa1.86□□□□□ -2.11
SPF1YEL031W KSH1Q8TGJ3 72 aa1.86□□□□□ -2.11
SPF1YEL031W SPS100P13130 326 aa1.86□□□□□ -2.11
SPF1YEL031W ARC15P40518 154 aaRIP-Chip data1.86□□□□□ -2.11not detected
SPF1YEL031W YML122CQ03207 126 aa1.86□□□□□ -2.11
SPF1YEL031W YBR200W-AQ3E755 54 aa1.86□□□□□ -2.11
SPF1YEL031W YLR236CA0A023PZG4 107 aa1.86□□□□□ -2.11
SPF1YEL031W YDL022C-AP0C5L6 82 aa1.86□□□□□ -2.11
SPF1YEL031W TDA2P40045 126 aa1.86□□□□□ -2.11
SPF1YEL031W ATP18P81450 59 aa1.86□□□□□ -2.11
SPF1YEL031W PBP4Q07362 185 aaKnown RBP1.86□□□□□ -2.11
SPF1YEL031W ATP20Q12233 115 aa1.86□□□□□ -2.11
SPF1YEL031W YMR175W-AQ3E766 64 aa1.86□□□□□ -2.11
SPF1YEL031W YPR053CQ6Q5F3 151 aa1.86□□□□□ -2.11
SPF1YEL031W RPL36BO14455 100 aaKnown RBP1.85□□□□□ -2.11
SPF1YEL031W RPL36AP05745 100 aaPredicted RBP1.85□□□□□ -2.11
SPF1YEL031W RPL16AP26784 199 aaKnown RBP1.85□□□□□ -2.11
SPF1YEL031W YBR144CP34215 104 aa1.85□□□□□ -2.11
SPF1YEL031W PMP3P87284 55 aa1.85□□□□□ -2.11
SPF1YEL031W YMR295CQ03559 197 aa1.85□□□□□ -2.11
SPF1YEL031W YAL065CO13511 128 aa1.85□□□□□ -2.11
SPF1YEL031W YNL194CP40169 301 aa1.85□□□□□ -2.11
SPF1YEL031W SFT1P43682 97 aa1.85□□□□□ -2.11
SPF1YEL031W MMS2P53152 137 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms