RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W RPL9AP05738 191 aaKnown RBP1.4□□□□□ -2.18
SIR4YDR227W HSP150P32478 413 aa1.4□□□□□ -2.18
SIR4YDR227W ERI1P62651 68 aaKnown RBP1.4□□□□□ -2.18
SIR4YDR227W YBL112CQ3E7Y4 105 aa1.4□□□□□ -2.18
SIR4YDR227W TOM6P33448 61 aa1.4□□□□□ -2.19
SIR4YDR227W YJL027CP47063 138 aaPredicted RBP1.4□□□□□ -2.19
SIR4YDR227W VPS55P47111 140 aa1.4□□□□□ -2.19
SIR4YDR227W SOM1Q05676 74 aa1.4□□□□□ -2.19
SIR4YDR227W RTC6O14464 93 aa1.4□□□□□ -2.19
SIR4YDR227W SWD3P38123 315 aa1.4□□□□□ -2.19
SIR4YDR227W VTC1P40046 129 aaRIP-Chip data1.4□□□□□ -2.19not detected
SIR4YDR227W RGM1Q00453 211 aa1.4□□□□□ -2.19
SIR4YDR227W MET31Q03081 177 aa1.4□□□□□ -2.19
SIR4YDR227W HSP26P15992 214 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
SIR4YDR227W FYV5P25585 152 aa1.4□□□□□ -2.19
SIR4YDR227W RPR2P40571 144 aa1.4□□□□□ -2.19
SIR4YDR227W COA4Q05809 96 aa1.4□□□□□ -2.19
SIR4YDR227W ANT1Q06497 328 aa1.4□□□□□ -2.19
SIR4YDR227W YAL063C-AQ3E791 96 aa1.4□□□□□ -2.19
SIR4YDR227W ODC2Q99297 307 aa1.4□□□□□ -2.19
SIR4YDR227W URA2P07259 2214 aaKnown RBP1.39□□□□□ -2.19
SIR4YDR227W HSP12P22943 109 aaKnown RBP1.39□□□□□ -2.19
SIR4YDR227W YER084WP40057 128 aa1.39□□□□□ -2.19
SIR4YDR227W YER181CP40097 107 aa1.39□□□□□ -2.19
SIR4YDR227W FLX1P40464 311 aa1.39□□□□□ -2.19
SIR4YDR227W DIM1P41819 318 aaKnown RBP1.39□□□□□ -2.19
SIR4YDR227W DCV1P43595 202 aa1.39□□□□□ -2.19
SIR4YDR227W ASP1P38986 381 aaPredicted RBP1.39□□□□□ -2.19
SIR4YDR227W NRG2P38082 220 aa1.38□□□□□ -2.19
SIR4YDR227W YGL088WP53151 121 aa1.38□□□□□ -2.19
SIR4YDR227W YNR077CP53758 84 aa1.38□□□□□ -2.19
SIR4YDR227W ATP15P21306 62 aa1.38□□□□□ -2.19
SIR4YDR227W ELP6Q04868 273 aa1.38□□□□□ -2.19
SIR4YDR227W VAM10Q08474 114 aa1.38□□□□□ -2.19
SIR4YDR227W YIL014C-AQ02598 104 aa1.38□□□□□ -2.19
SIR4YDR227W YDR114CQ04597 100 aa1.38□□□□□ -2.19
SIR4YDR227W PAU21P0CE86 164 aa1.37□□□□□ -2.19
SIR4YDR227W PAU22P0CE87 164 aa1.37□□□□□ -2.19
SIR4YDR227W QCR10P37299 77 aa1.37□□□□□ -2.19
SIR4YDR227W YDR246W-AQ3E763 66 aa1.37□□□□□ -2.19
SIR4YDR227W YCR085WP25650 117 aa1.37□□□□□ -2.19
SIR4YDR227W PAM16P42949 149 aa1.37□□□□□ -2.19
SIR4YDR227W MRPS16Q02608 121 aa1.37□□□□□ -2.19
SIR4YDR227W YLR365WQ7LIF2 110 aa1.37□□□□□ -2.19
SIR4YDR227W YHR130CP38834 111 aa1.36□□□□□ -2.19
SIR4YDR227W MPM1P40364 252 aa1.36□□□□□ -2.19
SIR4YDR227W YDR210WQ03482 75 aa1.36□□□□□ -2.19
SIR4YDR227W RPB11P38902 120 aa1.36□□□□□ -2.19
SIR4YDR227W ATP19P81451 68 aa1.36□□□□□ -2.19
SIR4YDR227W MIC10Q96VH5 97 aa1.36□□□□□ -2.19
SIR4YDR227W DAN1P47178 298 aa1.36□□□□□ -2.19
SIR4YDR227W BOL2P53082 120 aa1.36□□□□□ -2.19
SIR4YDR227W YLR042CQ07990 161 aa1.36□□□□□ -2.19
SIR4YDR227W Q0017Q9ZZX8 53 aa1.36□□□□□ -2.19
SIR4YDR227W RPS25BP0C0T4 108 aaKnown RBP1.35□□□□□ -2.19
SIR4YDR227W YHR212W-AP0CX91 67 aa1.35□□□□□ -2.19
SIR4YDR227W YAR029WP39549 74 aa1.35□□□□□ -2.19
SIR4YDR227W EMC5P40540 141 aa1.35□□□□□ -2.19
SIR4YDR227W YGR026WP53217 278 aa1.35□□□□□ -2.19
SIR4YDR227W YGL194C-AQ2V2P6 80 aa1.35□□□□□ -2.19
SIR4YDR227W YCL048W-AQ2V2Q2 79 aa1.35□□□□□ -2.19
SIR4YDR227W YGR240C-AQ3E786 66 aa1.35□□□□□ -2.19
SIR4YDR227W MED11Q99278 115 aa1.35□□□□□ -2.19
SIR4YDR227W ECM12O13529 151 aa1.35□□□□□ -2.19
SIR4YDR227W FYV4P38783 130 aaPredicted RBP1.35□□□□□ -2.19
SIR4YDR227W YFL051CP43552 160 aa1.35□□□□□ -2.19
SIR4YDR227W AUA1P32450 94 aa1.35□□□□□ -2.19
SIR4YDR227W YBR219CP38317 127 aa1.35□□□□□ -2.19
SIR4YDR227W PAU23Q07987 124 aa1.35□□□□□ -2.19
SIR4YDR227W PAU17Q12370 124 aa1.35□□□□□ -2.19
SIR4YDR227W YCR050CP25630 102 aa1.35□□□□□ -2.19
SIR4YDR227W RPL14AP36105 138 aaKnown RBP1.35□□□□□ -2.19
SIR4YDR227W RRT1P38192 103 aa1.35□□□□□ -2.19
SIR4YDR227W UMP1P38293 148 aa1.35□□□□□ -2.19
SIR4YDR227W GPI19Q04082 140 aa1.35□□□□□ -2.19
SIR4YDR227W AVO2Q04749 426 aa1.35□□□□□ -2.19
SIR4YDR227W YLR296WQ05898 108 aa1.35□□□□□ -2.19
SIR4YDR227W SCP1Q08873 200 aa1.35□□□□□ -2.19
SIR4YDR227W ENV10Q99382 181 aa1.35□□□□□ -2.19
SIR4YDR227W YIL059CP40520 121 aa1.34□□□□□ -2.19
SIR4YDR227W YOL118CQ08259 102 aa1.34□□□□□ -2.19
SIR4YDR227W YPL247CQ12523 523 aa1.34□□□□□ -2.19
SIR4YDR227W YGR121W-AQ3E816 71 aa1.34□□□□□ -2.19
SIR4YDR227W MIX23P38162 196 aa1.34□□□□□ -2.2
SIR4YDR227W YHR138CP38841 114 aaPredicted RBP1.34□□□□□ -2.2
SIR4YDR227W YNL217WP40152 326 aa1.34□□□□□ -2.2
SIR4YDR227W BNS1P50084 137 aa1.34□□□□□ -2.2
SIR4YDR227W YCL021W-AQ96VH3 125 aa1.34□□□□□ -2.2
SIR4YDR227W YAL065CO13511 128 aa1.34□□□□□ -2.2
SIR4YDR227W SPI1P40092 148 aa1.34□□□□□ -2.2
SIR4YDR227W NMA1Q06178 401 aaKnown RBP1.34□□□□□ -2.2
SIR4YDR227W YOR015WQ12169 119 aa1.34□□□□□ -2.2
SIR4YDR227W YEL014CP39999 101 aa1.33□□□□□ -2.2
SIR4YDR227W ATG40Q99325 256 aa1.33□□□□□ -2.2
SIR4YDR227W YDL241WQ07738 123 aa1.33□□□□□ -2.2
SIR4YDR227W YPL038W-AQ3E7B4 63 aa1.33□□□□□ -2.2
SIR4YDR227W OST5Q92316 86 aa1.33□□□□□ -2.2
SIR4YDR227W POR2P40478 281 aa1.32□□□□□ -2.2
SIR4YDR227W YLR162WQ06235 118 aa1.32□□□□□ -2.2
SIR4YDR227W MSL1P40567 111 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms