RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C RPL16AP26784 199 aaKnown RBP3.66□□□□□ -1.82
SCM3YDL139C PRY2P36110 329 aa3.66□□□□□ -1.82
SCM3YDL139C SEC72P39742 193 aaKnown RBP3.66□□□□□ -1.82
SCM3YDL139C YJR146WP47174 117 aa3.66□□□□□ -1.82
SCM3YDL139C CGR1P53188 120 aa3.66□□□□□ -1.82
SCM3YDL139C YER078W-AQ3E7A2 54 aa3.66□□□□□ -1.82
SCM3YDL139C ACP1P32463 125 aa3.65□□□□□ -1.83
SCM3YDL139C UTR5P32630 166 aa3.65□□□□□ -1.83
SCM3YDL139C MSL1P40567 111 aaPredicted RBP3.65□□□□□ -1.83
SCM3YDL139C YFL067WP43537 175 aa3.65□□□□□ -1.83
SCM3YDL139C YFR057WP43625 151 aa3.65□□□□□ -1.83
SCM3YDL139C YGL118CP53132 145 aa3.65□□□□□ -1.83
SCM3YDL139C YDR274CP87283 123 aa3.65□□□□□ -1.83
SCM3YDL139C YMR103CQ04436 120 aa3.65□□□□□ -1.83
SCM3YDL139C RDS3Q06835 107 aaPredicted RBP3.65□□□□□ -1.83
SCM3YDL139C YPL162CQ12042 273 aa3.65□□□□□ -1.83
SCM3YDL139C COA6Q3E846 104 aa3.65□□□□□ -1.83
SCM3YDL139C YBR219CP38317 127 aa3.64□□□□□ -1.83
SCM3YDL139C DCV1P43595 202 aa3.64□□□□□ -1.83
SCM3YDL139C UTP23Q12339 254 aaKnown RBP3.64□□□□□ -1.83
SCM3YDL139C MPC2P38857 129 aa3.63□□□□□ -1.83
SCM3YDL139C YNL217WP40152 326 aa3.63□□□□□ -1.83
SCM3YDL139C MRPS12P53732 153 aa3.63□□□□□ -1.83
SCM3YDL139C YNL190WP53872 204 aa3.63□□□□□ -1.83
SCM3YDL139C EOS1P53938 366 aa3.63□□□□□ -1.83
SCM3YDL139C UPS3Q04006 179 aa3.63□□□□□ -1.83
SCM3YDL139C YGR035W-AQ45U48 73 aa3.63□□□□□ -1.83
SCM3YDL139C RPS11AP0CX47 156 aaKnown RBP3.62□□□□□ -1.83
SCM3YDL139C RPS11BP0CX48 156 aaKnown RBP3.62□□□□□ -1.83
SCM3YDL139C ATP15P21306 62 aa3.62□□□□□ -1.83
SCM3YDL139C YKL070WP36087 169 aa3.62□□□□□ -1.83
SCM3YDL139C CIN5P40917 295 aa3.62□□□□□ -1.83
SCM3YDL139C YPS5P53057 165 aa3.62□□□□□ -1.83
SCM3YDL139C ALG13P53178 202 aa3.62□□□□□ -1.83
SCM3YDL139C GIS2P53849 153 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
SCM3YDL139C YDR366CP87287 132 aa3.62□□□□□ -1.83
SCM3YDL139C RRG8Q06109 277 aa3.62□□□□□ -1.83
SCM3YDL139C MID2P36027 376 aa3.61□□□□□ -1.83
SCM3YDL139C YBR209WP38311 105 aa3.61□□□□□ -1.83
SCM3YDL139C TOS6P48560 102 aa3.61□□□□□ -1.83
SCM3YDL139C TVP18Q04767 167 aa3.61□□□□□ -1.83
SCM3YDL139C LSO2Q3E772 92 aaKnown RBP3.61□□□□□ -1.83
SCM3YDL139C TRP1P00912 224 aa3.6□□□□□ -1.83
SCM3YDL139C ATP5P09457 212 aa3.6□□□□□ -1.83
SCM3YDL139C RPL27BP0C2H7 136 aaKnown RBP3.6□□□□□ -1.83
SCM3YDL139C YEL008WP40001 126 aa3.6□□□□□ -1.83
SCM3YDL139C AIM11P87275 137 aa3.6□□□□□ -1.83
SCM3YDL139C PBA1Q05778 276 aa3.6□□□□□ -1.83
SCM3YDL139C RPL2AP0CX45 254 aaKnown RBP3.59□□□□□ -1.83
SCM3YDL139C RPL2BP0CX46 254 aaKnown RBP3.59□□□□□ -1.83
SCM3YDL139C UBC5P15732 148 aa3.59□□□□□ -1.83
SCM3YDL139C YRA2P36036 203 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
SCM3YDL139C YKR070WP36151 352 aaKnown RBP3.59□□□□□ -1.83
SCM3YDL139C YER085CP40058 173 aa3.59□□□□□ -1.83
SCM3YDL139C SAE3P89114 91 aa3.59□□□□□ -1.83
SCM3YDL139C COX12Q01519 83 aa3.59□□□□□ -1.83
SCM3YDL139C SCW10Q04951 389 aa3.59□□□□□ -1.83
SCM3YDL139C PAU23Q07987 124 aa3.59□□□□□ -1.83
SCM3YDL139C YPL261CQ08976 102 aa3.59□□□□□ -1.83
SCM3YDL139C FYV7Q12247 151 aa3.59□□□□□ -1.83
SCM3YDL139C PAU17Q12370 124 aa3.59□□□□□ -1.83
SCM3YDL139C YPR170W-BP0C5R9 85 aa3.58□□□□□ -1.84
SCM3YDL139C RPS8AP0CX39 200 aaKnown RBP3.58□□□□□ -1.84
SCM3YDL139C RPS8BP0CX40 200 aaKnown RBP3.58□□□□□ -1.84
SCM3YDL139C YNL198CP40166 100 aa3.58□□□□□ -1.84
SCM3YDL139C KEG1P43614 200 aa3.58□□□□□ -1.84
SCM3YDL139C CNL1Q06333 122 aa3.58□□□□□ -1.84
SCM3YDL139C YDL085C-AQ3E7B7 68 aaKnown RBP3.58□□□□□ -1.84
SCM3YDL139C MBF1O14467 151 aaKnown RBP3.57□□□□□ -1.84
SCM3YDL139C RPL28P02406 149 aaKnown RBP3.57□□□□□ -1.84
SCM3YDL139C APS1P35181 156 aa3.57□□□□□ -1.84
SCM3YDL139C YKR041WP36134 250 aa3.57□□□□□ -1.84
SCM3YDL139C AIM29P36154 155 aa3.57□□□□□ -1.84
SCM3YDL139C YBL081WP38180 368 aaKnown RBP3.57□□□□□ -1.84
SCM3YDL139C HHF1P02309 103 aaKnown RBP3.56□□□□□ -1.84
SCM3YDL139C OXA1P39952 402 aa3.56□□□□□ -1.84
SCM3YDL139C YIL059CP40520 121 aa3.56□□□□□ -1.84
SCM3YDL139C MDN1Q12019 4910 aaKnown RBP3.56□□□□□ -1.84
SCM3YDL139C YPL073CP40323 161 aa3.55□□□□□ -1.84
SCM3YDL139C COX16P47081 118 aa3.55□□□□□ -1.84
SCM3YDL139C YMR295CQ03559 197 aa3.55□□□□□ -1.84
SCM3YDL139C YLR050CQ12155 161 aaKnown RBP3.55□□□□□ -1.84
SCM3YDL139C YOR008C-AQ3E7B9 74 aa3.55□□□□□ -1.84
SCM3YDL139C YLL066W-BQ8TGJ7 56 aa3.55□□□□□ -1.84
SCM3YDL139C ADH2P00331 348 aaKnown RBP3.54□□□□□ -1.84
SCM3YDL139C TOA2P32774 122 aa3.54□□□□□ -1.84
SCM3YDL139C HAL1Q01766 294 aa3.54□□□□□ -1.84
SCM3YDL139C RRT15Q3E811 62 aa3.54□□□□□ -1.84
SCM3YDL139C RPL31AP0C2H8 113 aaKnown RBP3.53□□□□□ -1.84
SCM3YDL139C RPF1P38805 295 aaKnown RBP3.53□□□□□ -1.84
SCM3YDL139C COX14P39103 70 aa3.53□□□□□ -1.84
SCM3YDL139C YLR194CQ05777 254 aa3.53□□□□□ -1.84
SCM3YDL139C RPL18AP0CX49 186 aaKnown RBP3.52□□□□□ -1.85
SCM3YDL139C RPL18BP0CX50 186 aaKnown RBP3.52□□□□□ -1.85
SCM3YDL139C YKL044WP36092 106 aa3.52□□□□□ -1.85
SCM3YDL139C ARC15P40518 154 aaRIP-Chip data3.52□□□□□ -1.85not detected
SCM3YDL139C YJR085CP47131 105 aaKnown RBP3.52□□□□□ -1.85
SCM3YDL139C CWC27Q02770 301 aa3.52□□□□□ -1.85
SCM3YDL139C ARO2P28777 376 aaKnown RBP3.51□□□□□ -1.85
SCM3YDL139C UGX2P32772 223 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms