RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	ECM33	P38248	429 aa	Known RBP	5.33	□□□□□ -1.56
CDC7	YDL017W	MPC2	P38857	129 aa		5.33	□□□□□ -1.56
CDC7	YDL017W	YJR146W	P47174	117 aa		5.33	□□□□□ -1.56
CDC7	YDL017W	YML079W	Q03629	201 aa		5.33	□□□□□ -1.56
CDC7	YDL017W	YDL022C-A	P0C5L6	82 aa		5.33	□□□□□ -1.56
CDC7	YDL017W	URM1	P40554	99 aa	Predicted RBP	5.33	□□□□□ -1.56
CDC7	YDL017W	YCH1	P42937	148 aa		5.33	□□□□□ -1.56
CDC7	YDL017W	YPL261C	Q08976	102 aa		5.33	□□□□□ -1.56
CDC7	YDL017W	RPL2A	P0CX45	254 aa	Known RBP	5.32	□□□□□ -1.56
CDC7	YDL017W	RPL2B	P0CX46	254 aa	Known RBP	5.32	□□□□□ -1.56
CDC7	YDL017W	VHS2	P40463	436 aa		5.32	□□□□□ -1.56
CDC7	YDL017W	YDL186W	P48568	277 aa		5.32	□□□□□ -1.56
CDC7	YDL017W	RPS11A	P0CX47	156 aa	Known RBP	5.31	□□□□□ -1.56
CDC7	YDL017W	RPS11B	P0CX48	156 aa	Known RBP	5.31	□□□□□ -1.56
CDC7	YDL017W	RPL16A	P26784	199 aa	Known RBP	5.31	□□□□□ -1.56
CDC7	YDL017W	YBR144C	P34215	104 aa		5.31	□□□□□ -1.56
CDC7	YDL017W	MSA1	Q08471	629 aa		5.31	□□□□□ -1.56
CDC7	YDL017W	RPL32	P38061	130 aa	Known RBP	5.3	□□□□□ -1.56
CDC7	YDL017W	RPF1	P38805	295 aa	Known RBP	5.3	□□□□□ -1.56
CDC7	YDL017W	YEL067C	P39978	195 aa		5.3	□□□□□ -1.56
CDC7	YDL017W	AIM11	P87275	137 aa		5.3	□□□□□ -1.56
CDC7	YDL017W	ADH2	P00331	348 aa	Known RBP	5.29	□□□□□ -1.56
CDC7	YDL017W	YKR041W	P36134	250 aa		5.29	□□□□□ -1.56
CDC7	YDL017W	YNR077C	P53758	84 aa		5.29	□□□□□ -1.56
CDC7	YDL017W	RPS8A	P0CX39	200 aa	Known RBP	5.28	□□□□□ -1.56
CDC7	YDL017W	RPS8B	P0CX40	200 aa	Known RBP	5.28	□□□□□ -1.56
CDC7	YDL017W	ATP15	P21306	62 aa		5.28	□□□□□ -1.56
CDC7	YDL017W	ELC1	Q03071	99 aa		5.28	□□□□□ -1.56
CDC7	YDL017W	YGR035W-A	Q45U48	73 aa		5.28	□□□□□ -1.56
CDC7	YDL017W	TRP1	P00912	224 aa		5.28	□□□□□ -1.56
CDC7	YDL017W	YKL069W	P36088	180 aa		5.28	□□□□□ -1.56
CDC7	YDL017W	YDR274C	P87283	123 aa		5.28	□□□□□ -1.56
CDC7	YDL017W	YLR296W	Q05898	108 aa		5.28	□□□□□ -1.56
CDC7	YDL017W	YIL002W-A	Q3E7Z5	69 aa		5.28	□□□□□ -1.56
CDC7	YDL017W	CYC7	P00045	113 aa		5.27	□□□□□ -1.57
CDC7	YDL017W	AGE2	P40529	298 aa		5.27	□□□□□ -1.57
CDC7	YDL017W	YKL023C-A	Q2V2P3	75 aa		5.27	□□□□□ -1.57
CDC7	YDL017W	YIL102C-A	Q2V2P5	75 aa		5.27	□□□□□ -1.57
CDC7	YDL017W	MRP10	O75012	95 aa		5.26	□□□□□ -1.57
CDC7	YDL017W	YNL217W	P40152	326 aa		5.26	□□□□□ -1.57
CDC7	YDL017W	YNL198C	P40166	100 aa		5.26	□□□□□ -1.57
CDC7	YDL017W	YPS5	P53057	165 aa		5.26	□□□□□ -1.57
CDC7	YDL017W	IGO2	Q9P305	131 aa		5.26	□□□□□ -1.57
CDC7	YDL017W	UBC5	P15732	148 aa		5.25	□□□□□ -1.57
CDC7	YDL017W	AIM29	P36154	155 aa		5.25	□□□□□ -1.57
CDC7	YDL017W	OXA1	P39952	402 aa		5.25	□□□□□ -1.57
CDC7	YDL017W	VTC1	P40046	129 aa	RIP-Chip data	5.25	□□□□□ -1.57	not detected
CDC7	YDL017W	YFR057W	P43625	151 aa		5.25	□□□□□ -1.57
CDC7	YDL017W	YOR097C	Q12274	175 aa	Predicted RBP	5.25	□□□□□ -1.57
CDC7	YDL017W	YBR209W	P38311	105 aa		5.24	□□□□□ -1.57
CDC7	YDL017W	KRE9	P39005	276 aa		5.24	□□□□□ -1.57
CDC7	YDL017W	CIN5	P40917	295 aa		5.24	□□□□□ -1.57
CDC7	YDL017W	YGL088W	P53151	121 aa		5.24	□□□□□ -1.57
CDC7	YDL017W	PMP3	P87284	55 aa		5.24	□□□□□ -1.57
CDC7	YDL017W	YLR194C	Q05777	254 aa		5.24	□□□□□ -1.57
CDC7	YDL017W	YEL008W	P40001	126 aa		5.23	□□□□□ -1.57
CDC7	YDL017W	PAI3	P01094	68 aa		5.23	□□□□□ -1.57
CDC7	YDL017W	YER181C	P40097	107 aa		5.23	□□□□□ -1.57
CDC7	YDL017W	MRPS12	P53732	153 aa		5.23	□□□□□ -1.57
CDC7	YDL017W	COX12	Q01519	83 aa		5.23	□□□□□ -1.57
CDC7	YDL017W	YBR126W-A	Q8TGU7	68 aa		5.23	□□□□□ -1.57
CDC7	YDL017W	DUT1	P33317	147 aa		5.22	□□□□□ -1.57
CDC7	YDL017W	PEX17	P40155	199 aa		5.22	□□□□□ -1.57
CDC7	YDL017W	YIL059C	P40520	121 aa		5.22	□□□□□ -1.57
CDC7	YDL017W	SCW10	Q04951	389 aa		5.22	□□□□□ -1.57
CDC7	YDL017W	YCR075W-A	Q3E830	75 aa		5.22	□□□□□ -1.57
CDC7	YDL017W	RPL18A	P0CX49	186 aa	Known RBP	5.21	□□□□□ -1.58
CDC7	YDL017W	RPL18B	P0CX50	186 aa	Known RBP	5.21	□□□□□ -1.58
CDC7	YDL017W	YPT53	P36019	220 aa		5.21	□□□□□ -1.58
CDC7	YDL017W	YER085C	P40058	173 aa		5.21	□□□□□ -1.58
CDC7	YDL017W	YCL021W-A	Q96VH3	125 aa		5.21	□□□□□ -1.58
CDC7	YDL017W	ANB1	P19211	157 aa		5.2	□□□□□ -1.58
CDC7	YDL017W	HYP2	P23301	157 aa	Known RBP	5.2	□□□□□ -1.58
CDC7	YDL017W	SHU1	P38751	150 aa		5.2	□□□□□ -1.58
CDC7	YDL017W	YGR240C-A	Q3E786	66 aa		5.2	□□□□□ -1.58
CDC7	YDL017W	RPL28	P02406	149 aa	Known RBP	5.19	□□□□□ -1.58
CDC7	YDL017W	YCR001W	P25347	104 aa		5.19	□□□□□ -1.58
CDC7	YDL017W	ARC15	P40518	154 aa	RIP-Chip data	5.19	□□□□□ -1.58	not detected
CDC7	YDL017W	EOS1	P53938	366 aa		5.19	□□□□□ -1.58
CDC7	YDL017W	UGX2	P32772	223 aa		5.18	□□□□□ -1.58
CDC7	YDL017W	POP7	P38291	140 aa		5.18	□□□□□ -1.58
CDC7	YDL017W	YNL190W	P53872	204 aa		5.18	□□□□□ -1.58
CDC7	YDL017W	VAM10	Q08474	114 aa		5.18	□□□□□ -1.58
CDC7	YDL017W	YMR122W-A	Q3E842	84 aa		5.18	□□□□□ -1.58
CDC7	YDL017W	QCR8	P08525	94 aa		5.17	□□□□□ -1.58
CDC7	YDL017W	LSM6	Q06406	86 aa	Known RBP	5.17	□□□□□ -1.58
CDC7	YDL017W	YBR219C	P38317	127 aa		5.16	□□□□□ -1.58
CDC7	YDL017W	YAR029W	P39549	74 aa		5.16	□□□□□ -1.58
CDC7	YDL017W	ADH1	P00330	348 aa	Known RBP	5.15	□□□□□ -1.58
CDC7	YDL017W	MID2	P36027	376 aa		5.15	□□□□□ -1.58
CDC7	YDL017W	NRG2	P38082	220 aa		5.15	□□□□□ -1.58
CDC7	YDL017W	ERI1	P62651	68 aa	Known RBP	5.15	□□□□□ -1.58
CDC7	YDL017W	YMR295C	Q03559	197 aa		5.15	□□□□□ -1.58
CDC7	YDL017W	CPR1	P14832	162 aa	Known RBP	5.14	□□□□□ -1.59
CDC7	YDL017W	COX14	P39103	70 aa		5.13	□□□□□ -1.59
CDC7	YDL017W	YLR281C	Q05863	155 aa		5.13	□□□□□ -1.59
CDC7	YDL017W	CRC1	Q12289	327 aa		5.13	□□□□□ -1.59
CDC7	YDL017W	CDC43	P18898	376 aa		5.13	□□□□□ -1.59
CDC7	YDL017W	NHP2	P32495	156 aa	Predicted RBP	5.13	□□□□□ -1.59
CDC7	YDL017W	SGF11	Q03067	99 aa		5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 28 ms