RNA–Protein interactions for RNA: YAR042W

SWH1, Transcript of Protein similar to mammalian oxysterol-binding protein, yeast

Gene SWH1, Length 3,567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWH1	YAR042W	YLR415C	O13578	112 aa		2.99	□□□□□ -1.93
SWH1	YAR042W	RAD6	P06104	172 aa		2.99	□□□□□ -1.93
SWH1	YAR042W	CTR2	P38865	189 aa		2.99	□□□□□ -1.93
SWH1	YAR042W	DUO1	P53168	247 aa	Known RBP	2.99	□□□□□ -1.93
SWH1	YAR042W	YNL190W	P53872	204 aa		2.99	□□□□□ -1.93
SWH1	YAR042W	PBI2	P0CT04	75 aa	Known RBP	2.99	□□□□□ -1.93
SWH1	YAR042W	RPS8A	P0CX39	200 aa	Known RBP	2.99	□□□□□ -1.93
SWH1	YAR042W	RPS8B	P0CX40	200 aa	Known RBP	2.99	□□□□□ -1.93
SWH1	YAR042W	SED1	Q01589	338 aa		2.99	□□□□□ -1.93
SWH1	YAR042W	INO2	P26798	304 aa		2.98	□□□□□ -1.93
SWH1	YAR042W	VMA11	P32842	164 aa		2.98	□□□□□ -1.93
SWH1	YAR042W	MRPL24	P36525	258 aa	Predicted RBP	2.98	□□□□□ -1.93
SWH1	YAR042W	SUT1	P53032	299 aa	Known RBP	2.98	□□□□□ -1.93
SWH1	YAR042W	YOL160W	Q08321	113 aa		2.98	□□□□□ -1.93
SWH1	YAR042W	BPH1	P25356	2167 aa		2.98	□□□□□ -1.93
SWH1	YAR042W	MRPL38	P35996	138 aa	Predicted RBP	2.98	□□□□□ -1.93
SWH1	YAR042W	SPI1	P40092	148 aa		2.98	□□□□□ -1.93
SWH1	YAR042W	URM1	P40554	99 aa	Predicted RBP	2.98	□□□□□ -1.93
SWH1	YAR042W	YDL186W	P48568	277 aa		2.98	□□□□□ -1.93
SWH1	YAR042W	NCE103	P53615	221 aa		2.98	□□□□□ -1.93
SWH1	YAR042W	YNL234W	P53857	426 aa		2.98	□□□□□ -1.93
SWH1	YAR042W	YDR029W	Q12111	104 aa		2.98	□□□□□ -1.93
SWH1	YAR042W	YDR119W-A	Q2V2P9	66 aa		2.98	□□□□□ -1.93
SWH1	YAR042W	YPR053C	Q6Q5F3	151 aa		2.98	□□□□□ -1.93
SWH1	YAR042W	RPL18A	P0CX49	186 aa	Known RBP	2.97	□□□□□ -1.93
SWH1	YAR042W	RPL18B	P0CX50	186 aa	Known RBP	2.97	□□□□□ -1.93
SWH1	YAR042W	LCB3	P47013	409 aa		2.97	□□□□□ -1.93
SWH1	YAR042W	YJL027C	P47063	138 aa	Predicted RBP	2.97	□□□□□ -1.93
SWH1	YAR042W	YDL009C	Q12210	107 aa		2.97	□□□□□ -1.93
SWH1	YAR042W	Q0255	P03881	472 aa		2.97	□□□□□ -1.93
SWH1	YAR042W	PBA1	Q05778	276 aa		2.97	□□□□□ -1.93
SWH1	YAR042W	YCL021W-A	Q96VH3	125 aa		2.97	□□□□□ -1.93
SWH1	YAR042W	ADH5	P38113	351 aa	Known RBP	2.97	□□□□□ -1.93
SWH1	YAR042W	AIM19	P40502	157 aa		2.96	□□□□□ -1.93
SWH1	YAR042W	YGR025W	P53216	100 aa		2.96	□□□□□ -1.93
SWH1	YAR042W	CAX4	P53223	239 aa		2.96	□□□□□ -1.94
SWH1	YAR042W	MRPL23	Q12487	163 aa	Predicted RBP	2.96	□□□□□ -1.94
SWH1	YAR042W	ECM12	O13529	151 aa		2.96	□□□□□ -1.94
SWH1	YAR042W	RPL42A	P0CX27	106 aa	Known RBP	2.96	□□□□□ -1.94
SWH1	YAR042W	RPL42B	P0CX28	106 aa	Known RBP	2.96	□□□□□ -1.94
SWH1	YAR042W	SMP1	P38128	452 aa		2.96	□□□□□ -1.94
SWH1	YAR042W	YHL042W	P38729	150 aa		2.96	□□□□□ -1.94
SWH1	YAR042W	YER121W	P40076	114 aa		2.96	□□□□□ -1.94
SWH1	YAR042W	DCV1	P43595	202 aa		2.95	□□□□□ -1.94
SWH1	YAR042W	PBP4	Q07362	185 aa	Known RBP	2.95	□□□□□ -1.94
SWH1	YAR042W	YOL085C	Q99345	113 aa		2.95	□□□□□ -1.94
SWH1	YAR042W	TRP1	P00912	224 aa		2.95	□□□□□ -1.94
SWH1	YAR042W	RPL15A	P05748	204 aa	Known RBP	2.95	□□□□□ -1.94
SWH1	YAR042W	COX12	Q01519	83 aa		2.95	□□□□□ -1.94
SWH1	YAR042W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
SWH1	YAR042W	BNA1	P47096	177 aa		2.95	□□□□□ -1.94
SWH1	YAR042W	YGR045C	P53229	120 aa		2.95	□□□□□ -1.94
SWH1	YAR042W	YER039C-A	P0CD97	72 aa		2.94	□□□□□ -1.94
SWH1	YAR042W	YBR209W	P38311	105 aa		2.94	□□□□□ -1.94
SWH1	YAR042W	KEG1	P43614	200 aa		2.94	□□□□□ -1.94
SWH1	YAR042W	YGL260W	P53056	76 aa		2.94	□□□□□ -1.94
SWH1	YAR042W	YGL088W	P53151	121 aa		2.94	□□□□□ -1.94
SWH1	YAR042W	MRPS12	P53732	153 aa		2.94	□□□□□ -1.94
SWH1	YAR042W	YLR042C	Q07990	161 aa		2.94	□□□□□ -1.94
SWH1	YAR042W	HUR1	P45820	110 aa		2.94	□□□□□ -1.94
SWH1	YAR042W	COX17	Q12287	69 aa		2.94	□□□□□ -1.94
SWH1	YAR042W	CCW14	O13547	238 aa		2.93	□□□□□ -1.94
SWH1	YAR042W	RPL16A	P26784	199 aa	Known RBP	2.93	□□□□□ -1.94
SWH1	YAR042W	PEX17	P40155	199 aa		2.93	□□□□□ -1.94
SWH1	YAR042W	POR2	P40478	281 aa		2.93	□□□□□ -1.94
SWH1	YAR042W	WWM1	P43582	211 aa	Known RBP	2.93	□□□□□ -1.94
SWH1	YAR042W	YGR219W	P53307	113 aa		2.93	□□□□□ -1.94
SWH1	YAR042W	YDR381C-A	Q3E6R5	114 aa		2.93	□□□□□ -1.94
SWH1	YAR042W	IES6	P32617	166 aa		2.92	□□□□□ -1.94
SWH1	YAR042W	EMC6	Q12431	108 aa		2.92	□□□□□ -1.94
SWH1	YAR042W	YJR146W	P47174	117 aa		2.92	□□□□□ -1.94
SWH1	YAR042W	YCL048W-A	Q2V2Q2	79 aa		2.92	□□□□□ -1.94
SWH1	YAR042W	YBR200W-A	Q3E755	54 aa		2.92	□□□□□ -1.94
SWH1	YAR042W	YPL038W-A	Q3E7B4	63 aa		2.92	□□□□□ -1.94
SWH1	YAR042W	YHL018W	P38744	120 aa	Predicted RBP	2.91	□□□□□ -1.94
SWH1	YAR042W	SHU1	P38751	150 aa		2.91	□□□□□ -1.94
SWH1	YAR042W	YML122C	Q03207	126 aa		2.91	□□□□□ -1.94
SWH1	YAR042W	GCN1	P33892	2672 aa	Known RBP	2.91	□□□□□ -1.94
SWH1	YAR042W	STF1	P01098	86 aa		2.91	□□□□□ -1.94
SWH1	YAR042W	RPL2A	P0CX45	254 aa	Known RBP	2.91	□□□□□ -1.94
SWH1	YAR042W	RPL2B	P0CX46	254 aa	Known RBP	2.91	□□□□□ -1.94
SWH1	YAR042W	YOR034C-A	Q3E735	80 aa		2.91	□□□□□ -1.94
SWH1	YAR042W	UBC5	P15732	148 aa		2.91	□□□□□ -1.94
SWH1	YAR042W	TOM6	P33448	61 aa		2.91	□□□□□ -1.94
SWH1	YAR042W	MPC2	P38857	129 aa		2.91	□□□□□ -1.94
SWH1	YAR042W	YOR011W-A	Q3E807	68 aa		2.91	□□□□□ -1.94
SWH1	YAR042W	YHR022C	P38763	256 aa		2.9	□□□□□ -1.94
SWH1	YAR042W	KRE9	P39005	276 aa		2.9	□□□□□ -1.94
SWH1	YAR042W	YNL194C	P40169	301 aa		2.9	□□□□□ -1.94
SWH1	YAR042W	SBH2	P52871	88 aa		2.9	□□□□□ -1.94
SWH1	YAR042W	YCR050C	P25630	102 aa		2.9	□□□□□ -1.95
SWH1	YAR042W	SIM1	P40472	476 aa		2.9	□□□□□ -1.95
SWH1	YAR042W	RPL16B	P26785	198 aa	Known RBP	2.9	□□□□□ -1.95
SWH1	YAR042W	YSY6	P38374	65 aa		2.9	□□□□□ -1.95
SWH1	YAR042W	SPS100	P13130	326 aa		2.89	□□□□□ -1.95
SWH1	YAR042W	RRT13	P40042	185 aa		2.89	□□□□□ -1.95
SWH1	YAR042W	TOR2	P32600	2474 aa	Known RBP	2.89	□□□□□ -1.95
SWH1	YAR042W	TEL1	P38110	2787 aa		2.89	□□□□□ -1.95
SWH1	YAR042W	SVP26	P38869	228 aa		2.89	□□□□□ -1.95
SWH1	YAR042W	YIR020C	P40575	100 aa		2.89	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 69.4 ms