RNA–Protein interactions for RNA: RDN18-2

RDN18-2, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-2, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-2RDN18-2 AIM11P87275 137 aa7.69□□□□□ -1.18
RDN18-2RDN18-2 ATP15P21306 62 aa7.68□□□□□ -1.18
RDN18-2RDN18-2 ECM33P38248 429 aaKnown RBP7.68□□□□□ -1.18
RDN18-2RDN18-2 VHS2P40463 436 aa7.68□□□□□ -1.18
RDN18-2RDN18-2 YFR057WP43625 151 aa7.68□□□□□ -1.18
RDN18-2RDN18-2 ALG13P53178 202 aa7.68□□□□□ -1.18
RDN18-2RDN18-2 ISU2Q12056 156 aa7.68□□□□□ -1.18
RDN18-2RDN18-2 ELC1Q03071 99 aa7.68□□□□□ -1.18
RDN18-2RDN18-2 OXA1P39952 402 aa7.67□□□□□ -1.18
RDN18-2RDN18-2 MSA1Q08471 629 aa7.67□□□□□ -1.18
RDN18-2RDN18-2 RPS8AP0CX39 200 aaKnown RBP7.66□□□□□ -1.18
RDN18-2RDN18-2 RPS8BP0CX40 200 aaKnown RBP7.66□□□□□ -1.18
RDN18-2RDN18-2 YIL102C-AQ2V2P5 75 aa7.66□□□□□ -1.18
RDN18-2RDN18-2 ADH2P00331 348 aaKnown RBP7.66□□□□□ -1.18
RDN18-2RDN18-2 CIN5P40917 295 aa7.65□□□□□ -1.18
RDN18-2RDN18-2 YLR296WQ05898 108 aa7.65□□□□□ -1.18
RDN18-2RDN18-2 YDL186WP48568 277 aa7.64□□□□□ -1.19
RDN18-2RDN18-2 YGL088WP53151 121 aa7.64□□□□□ -1.19
RDN18-2RDN18-2 MPC2P38857 129 aa7.64□□□□□ -1.19
RDN18-2RDN18-2 RPL2AP0CX45 254 aaKnown RBP7.63□□□□□ -1.19
RDN18-2RDN18-2 RPL2BP0CX46 254 aaKnown RBP7.63□□□□□ -1.19
RDN18-2RDN18-2 RPS11AP0CX47 156 aaKnown RBP7.63□□□□□ -1.19
RDN18-2RDN18-2 RPS11BP0CX48 156 aaKnown RBP7.63□□□□□ -1.19
RDN18-2RDN18-2 YKL023C-AQ2V2P3 75 aa7.63□□□□□ -1.19
RDN18-2RDN18-2 YBR209WP38311 105 aa7.62□□□□□ -1.19
RDN18-2RDN18-2 IGO2Q9P305 131 aa7.62□□□□□ -1.19
RDN18-2RDN18-2 YCL042WP25572 119 aa7.62□□□□□ -1.19
RDN18-2RDN18-2 YCH1P42937 148 aa7.62□□□□□ -1.19
RDN18-2RDN18-2 SCW10Q04951 389 aa7.62□□□□□ -1.19
RDN18-2RDN18-2 RTG1P32607 177 aa7.61□□□□□ -1.19
RDN18-2RDN18-2 AIM29P36154 155 aa7.61□□□□□ -1.19
RDN18-2RDN18-2 YNL217WP40152 326 aa7.61□□□□□ -1.19
RDN18-2RDN18-2 TRP1P00912 224 aa7.6□□□□□ -1.19
RDN18-2RDN18-2 PAI3P01094 68 aa7.6□□□□□ -1.19
RDN18-2RDN18-2 YER085CP40058 173 aa7.6□□□□□ -1.19
RDN18-2RDN18-2 AGE2P40529 298 aa7.6□□□□□ -1.19
RDN18-2RDN18-2 YLR194CQ05777 254 aa7.6□□□□□ -1.19
RDN18-2RDN18-2 YOR097CQ12274 175 aaPredicted RBP7.6□□□□□ -1.19
RDN18-2RDN18-2 HYP2P23301 157 aaKnown RBP7.59□□□□□ -1.19
RDN18-2RDN18-2 YEL008WP40001 126 aa7.59□□□□□ -1.19
RDN18-2RDN18-2 MRPS12P53732 153 aa7.59□□□□□ -1.19
RDN18-2RDN18-2 YBR144CP34215 104 aa7.59□□□□□ -1.19
RDN18-2RDN18-2 YER181CP40097 107 aa7.59□□□□□ -1.19
RDN18-2RDN18-2 YPS5P53057 165 aa7.59□□□□□ -1.19
RDN18-2RDN18-2 RPL28P02406 149 aaKnown RBP7.58□□□□□ -1.2
RDN18-2RDN18-2 UBC5P15732 148 aa7.58□□□□□ -1.2
RDN18-2RDN18-2 RPL18AP0CX49 186 aaKnown RBP7.57□□□□□ -1.2
RDN18-2RDN18-2 RPL18BP0CX50 186 aaKnown RBP7.57□□□□□ -1.2
RDN18-2RDN18-2 CDC43P18898 376 aa7.57□□□□□ -1.2
RDN18-2RDN18-2 ANB1P19211 157 aa7.57□□□□□ -1.2
RDN18-2RDN18-2 YPT53P36019 220 aa7.57□□□□□ -1.2
RDN18-2RDN18-2 KRE9P39005 276 aa7.57□□□□□ -1.2
RDN18-2RDN18-2 YNL190WP53872 204 aa7.57□□□□□ -1.2
RDN18-2RDN18-2 YDR274CP87283 123 aa7.57□□□□□ -1.2
RDN18-2RDN18-2 MID2P36027 376 aa7.56□□□□□ -1.2
RDN18-2RDN18-2 YIL059CP40520 121 aa7.56□□□□□ -1.2
RDN18-2RDN18-2 ADH1P00330 348 aaKnown RBP7.55□□□□□ -1.2
RDN18-2RDN18-2 PMP3P87284 55 aa7.55□□□□□ -1.2
RDN18-2RDN18-2 YGR035W-AQ45U48 73 aa7.54□□□□□ -1.2
RDN18-2RDN18-2 YCL021W-AQ96VH3 125 aa7.54□□□□□ -1.2
RDN18-2RDN18-2 UTP20P35194 2493 aaKnown RBP7.54□□□□□ -1.2
RDN18-2RDN18-2 UGX2P32772 223 aa7.53□□□□□ -1.2
RDN18-2RDN18-2 SHU1P38751 150 aa7.53□□□□□ -1.2
RDN18-2RDN18-2 PEX17P40155 199 aa7.53□□□□□ -1.2
RDN18-2RDN18-2 CPR1P14832 162 aaKnown RBP7.52□□□□□ -1.2
RDN18-2RDN18-2 YGL015CP33199 130 aa7.52□□□□□ -1.2
RDN18-2RDN18-2 YCR001WP25347 104 aa7.52□□□□□ -1.21
RDN18-2RDN18-2 RUB1Q03919 77 aa7.51□□□□□ -1.21
RDN18-2RDN18-2 CYC7P00045 113 aa7.5□□□□□ -1.21
RDN18-2RDN18-2 LSM6Q06406 86 aaKnown RBP7.5□□□□□ -1.21
RDN18-2RDN18-2 MSN1P22148 382 aa7.5□□□□□ -1.21
RDN18-2RDN18-2 ARC15P40518 154 aaRIP-Chip data7.5□□□□□ -1.21not detected
RDN18-2RDN18-2 YBR219CP38317 127 aa7.49□□□□□ -1.21
RDN18-2RDN18-2 COX12Q01519 83 aa7.49□□□□□ -1.21
RDN18-2RDN18-2 YMR295CQ03559 197 aa7.49□□□□□ -1.21
RDN18-2RDN18-2 MLF3P32047 452 aa7.48□□□□□ -1.21
RDN18-2RDN18-2 POP7P38291 140 aa7.48□□□□□ -1.21
RDN18-2RDN18-2 MET32Q12041 191 aa7.48□□□□□ -1.21
RDN18-2RDN18-2 NRG2P38082 220 aa7.46□□□□□ -1.21
RDN18-2RDN18-2 ARO2P28777 376 aaKnown RBP7.45□□□□□ -1.22
RDN18-2RDN18-2 YCR075W-AQ3E830 75 aa7.45□□□□□ -1.22
RDN18-2RDN18-2 QCR8P08525 94 aa7.45□□□□□ -1.22
RDN18-2RDN18-2 YBR126W-AQ8TGU7 68 aa7.45□□□□□ -1.22
RDN18-2RDN18-2 NHP2P32495 156 aaPredicted RBP7.44□□□□□ -1.22
RDN18-2RDN18-2 YGR240C-AQ3E786 66 aa7.44□□□□□ -1.22
RDN18-2RDN18-2 YMR122W-AQ3E842 84 aa7.44□□□□□ -1.22
RDN18-2RDN18-2 SOH1P38633 127 aa7.43□□□□□ -1.22
RDN18-2RDN18-2 DYN1P36022 4092 aa7.42□□□□□ -1.22
RDN18-2RDN18-2 COX14P39103 70 aa7.41□□□□□ -1.22
RDN18-2RDN18-2 AIR2Q12476 344 aaKnown RBP7.41□□□□□ -1.22
RDN18-2RDN18-2 SLO1Q3E784 85 aa7.41□□□□□ -1.22
RDN18-2RDN18-2 VAM10Q08474 114 aa7.4□□□□□ -1.23
RDN18-2RDN18-2 YPL257WQ08974 193 aa7.4□□□□□ -1.23
RDN18-2RDN18-2 YIL002W-AQ3E7Z5 69 aa7.39□□□□□ -1.23
RDN18-2RDN18-2 YAR029WP39549 74 aa7.38□□□□□ -1.23
RDN18-2RDN18-2 CRC1Q12289 327 aa7.38□□□□□ -1.23
RDN18-2RDN18-2 CWP2P43497 92 aa7.37□□□□□ -1.23
RDN18-2RDN18-2 HPA2Q06592 156 aa7.37□□□□□ -1.23
RDN18-2RDN18-2 TOA2P32774 122 aa7.36□□□□□ -1.23
RDN18-2RDN18-2 YIA6P40556 373 aa7.36□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 99.3 ms