RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 GAB3Q8WWW8 586 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 CD101Q93033 1021 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 ATP2A3Q93084 1043 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 ELMO3Q96BJ8 720 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 ARRDC1-AS1Q9H2J1 176 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 SMOC1Q9H4F8 434 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 TMEM30AQ9NV96 361 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 SMPD4Q9NXE4 827 aa17.84■□□□□ 0.45
PHGDH-213ENST00000641272 UBE4BO95155 1302 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 ANTXRLA6NF34 631 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 POLR2DO15514 142 aaKnown RBP17.83■□□□□ 0.44
PHGDH-213ENST00000641272 CST3P01034 146 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-213ENST00000641272 DRD1P21728 446 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 HOXA6P31267 233 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 CASP4P49662 377 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 SEC13P55735 322 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 ZXDBP98169 803 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 AMPD3Q01432 767 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 PSMD6Q15008 389 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 AASDHQ4L235 1098 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-213ENST00000641272 VSTM1Q6UX27 236 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 DENND5BQ6ZUT9 1274 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 UNC13DQ70J99 1090 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 DPH6Q7L8W6 267 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 IQUBQ8NA54 791 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 ZNF507Q8TCN5 953 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 ZNF518BQ9C0D4 1074 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 GZF1Q9H116 711 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-213ENST00000641272 LINC00597Q9H2U6 94 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 KIAA1586Q9HCI6 787 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 SLC39A2Q9NP94 309 aa17.83■□□□□ 0.44
PHGDH-213ENST00000641272 NXF1Q9UBU9 619 aaKnown RBP17.83■□□□□ 0.44
PHGDH-213ENST00000641272 SOBPA7XYQ1 873 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 CLDN5O00501 218 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 SLC30A4O14863 429 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 ATG13O75143 517 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 ABL1P00519 1130 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 HDCP19113 662 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 RAP1GAPP47736 663 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 MYL6P60660 151 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 AMPD2Q01433 879 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 CUL4BQ13620 913 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 MAPRE1Q15691 268 aaKnown RBP17.82■□□□□ 0.44
PHGDH-213ENST00000641272 WDR72Q3MJ13 1102 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 PPM1JQ5JR12 505 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 XXYLT1Q8NBI6 393 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 MYCBPAPQ8TBZ2 947 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 SPATA17Q96L03 361 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 CNTNAP3BQ96NU0 1288 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 C7orf25Q9BPX7 421 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 CNTNAP3Q9BZ76 1288 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 SMYD3Q9H7B4 428 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 TRPM5Q9NZQ8 1165 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 ARHGAP26Q9UNA1 814 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 CPQQ9Y646 472 aa17.82■□□□□ 0.44
PHGDH-213ENST00000641272 LEFTY2O00292 366 aa17.81■□□□□ 0.44
PHGDH-213ENST00000641272 TRIM66O15016 1216 aa17.81■□□□□ 0.44
PHGDH-213ENST00000641272 EPN2O95208 641 aa17.81■□□□□ 0.44
PHGDH-213ENST00000641272 NFATC1O95644 943 aa17.81■□□□□ 0.44
PHGDH-213ENST00000641272 GNL1P36915 607 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-213ENST00000641272 EHHADHQ08426 723 aa17.81■□□□□ 0.44
PHGDH-213ENST00000641272 TRPC3Q13507 836 aa17.81■□□□□ 0.44
PHGDH-213ENST00000641272 DMC1Q14565 340 aa17.81■□□□□ 0.44
PHGDH-213ENST00000641272 CACNA2D4Q7Z3S7 1137 aa17.81■□□□□ 0.44
PHGDH-213ENST00000641272 PLEKHO2Q8TD55 490 aa17.81■□□□□ 0.44
PHGDH-213ENST00000641272 ZNF516Q92618 1163 aa17.81■□□□□ 0.44
PHGDH-213ENST00000641272 TPSD1Q9BZJ3 242 aa17.81■□□□□ 0.44
PHGDH-213ENST00000641272 RXFP3Q9NSD7 469 aa17.81■□□□□ 0.44
PHGDH-213ENST00000641272 A8MXQ7 604 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 DCLK1O15075 740 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 PHACTR2O75167 634 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 F13A1P00488 732 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 CYP17A1P05093 508 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 PTPN1P18031 435 aaKnown RBP17.8■□□□□ 0.44
PHGDH-213ENST00000641272 ME1P48163 572 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 BIRC3Q13489 604 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 PKP1Q13835 747 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 CNNM4Q6P4Q7 775 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 FILIP1Q7Z7B0 1213 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 C12orf50Q8NA57 414 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-213ENST00000641272 SPRYD3Q8NCJ5 442 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 ACDQ96AP0 544 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 TTLL2Q9BWV7 592 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 MAGEF1Q9HAY2 307 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 PCDHA7Q9UN72 937 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 INVSQ9Y283 1065 aa17.8■□□□□ 0.44
PHGDH-213ENST00000641272 EXOC3O60645 756 aa17.79■□□□□ 0.44
PHGDH-213ENST00000641272 TACC1O75410 805 aa17.79■□□□□ 0.44
PHGDH-213ENST00000641272 HSP90AA1P07900 732 aaKnown RBP17.79■□□□□ 0.44
PHGDH-213ENST00000641272 ZSCAN22P10073 491 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-213ENST00000641272 OPRD1P41143 372 aa17.79■□□□□ 0.44
PHGDH-213ENST00000641272 CDH8P55286 799 aa17.79■□□□□ 0.44
PHGDH-213ENST00000641272 TAF10Q12962 218 aa17.79■□□□□ 0.44
PHGDH-213ENST00000641272 GAB4Q2WGN9 574 aa17.79■□□□□ 0.44
PHGDH-213ENST00000641272 ZNF699Q32M78 642 aa17.79■□□□□ 0.44
PHGDH-213ENST00000641272 FBXO43Q4G163 708 aa17.79■□□□□ 0.44
PHGDH-213ENST00000641272 TDRD10Q5VZ19 366 aaKnown RBP17.79■□□□□ 0.44
PHGDH-213ENST00000641272 TCEAL6Q6IPX3 200 aa17.79■□□□□ 0.44
PHGDH-213ENST00000641272 SFTPA1Q8IWL2 248 aa17.79■□□□□ 0.44
PHGDH-213ENST00000641272 HSCBQ8IWL3 235 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms