RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 GIMAP6Q6P9H5 292 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 PID1Q7Z2X4 250 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 STAG2Q8N3U4 1231 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 FLCNQ8NFG4 579 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 UBE2E3Q969T4 207 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 POLR1BQ9H9Y6 1135 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 NKIRAS2Q9NYR9 191 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 DBNLQ9UJU6 430 aaKnown RBP6.53□□□□□ -1.36
CDKL5-205ENST00000623535 BLOC1S6Q9UL45 172 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 KCNJ14Q9UNX9 436 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 ZNF510Q9Y2H8 683 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 SKAP2O75563 359 aaPredicted RBP6.53□□□□□ -1.36
CDKL5-205ENST00000623535 FGBP02675 491 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 GNA15P30679 374 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 HNF1BP35680 557 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 RGS1Q08116 209 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 VN1R5Q7Z5H4 357 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 CBX8Q9HC52 389 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 NENFQ9UMX5 172 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 DAGLAQ9Y4D2 1042 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 GPATCH8Q9UKJ3 1502 aaKnown RBP6.53□□□□□ -1.36
CDKL5-205ENST00000623535 NEMP2A6NFY4 417 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 PJA2O43164 708 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 VPS33BQ9H267 617 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 RIBC2Q9H4K1 309 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 ING3Q9NXR8 418 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.53□□□□□ -1.36
CDKL5-205ENST00000623535 TRMT6Q9UJA5 497 aaKnown RBP6.53□□□□□ -1.36
CDKL5-205ENST00000623535 TUBE1Q9UJT0 475 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 COLEC10Q9Y6Z7 277 aa6.53□□□□□ -1.36
CDKL5-205ENST00000623535 COPEO14579 308 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 RHOAP61586 193 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 DNM1Q05193 864 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 SLFNL1Q499Z3 407 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 CYP20A1Q6UW02 462 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 MYO1HQ8N1T3 1032 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 CCNYL1Q8N7R7 359 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 FAM213AQ9BRX8 229 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 PUS7LQ9H0K6 701 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 ANGPTL2Q9UKU9 493 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 CFAP73A6NFT4 308 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 RHPN2P1A8MT19 583 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 TM9SF1O15321 606 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 UMPSP11172 480 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 NCAM1P13591 858 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 PER3P56645 1201 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 RWDD2BP57060 319 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 GPS1Q13098 491 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 METTL21CQ5VZV1 264 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 GSPT2Q8IYD1 628 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 USP33Q8TEY7 942 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 NKD1Q969G9 470 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 BLZF1Q9H2G9 400 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 LDAHQ9H6V9 325 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 RMND5AQ9H871 391 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 WARS2Q9UGM6 360 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 TIAM1Q13009 1591 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 EEF2KO00418 725 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 CCRL2O00421 344 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 ENTPD3O75355 529 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 VARSP26640 1264 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 PBLDP30039 288 aaPredicted RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 POU4F1Q01851 419 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 INSCQ1MX18 579 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 HDDC2Q7Z4H3 204 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 TMEM125Q96AQ2 219 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 NFE2L3Q9Y4A8 694 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 SF3B1O75533 1304 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 TRIM66O15016 1216 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 SLC8A1P32418 973 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 SLC26A2P50443 739 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 AGGF1Q8N302 714 aaeCLIP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 UBE2Q2Q8WVN8 375 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 STAMBPL1Q96FJ0 436 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 NDST4Q9H3R1 872 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 RABGEF1Q9UJ41 708 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 RBAK-RBAKDNI3L0D1 243 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 SLC27A2O14975 620 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 TEX33O43247 280 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 PHF2O75151 1096 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 CHRM3P20309 590 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 FOXK1P85037 733 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 LRRC63Q05C16 580 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 SCYL3Q8IZE3 742 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 SYTL5Q8TDW5 730 aaPredicted RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 PRMT1Q99873 361 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 GREM2Q9H772 168 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 LRRC4BQ9NT99 713 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 GUF1Q8N442 669 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 APBB2Q92870 758 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 BBS2Q9BXC9 721 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 SAP130Q9H0E3 1048 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 C3orf14Q9HBI5 128 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 ARIH1Q9Y4X5 557 aaPredicted RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 SGSM1Q2NKQ1 1148 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 KLHL26Q53HC5 615 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 PAGE2BQ5JRK9 111 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 MRNIPQ6NTE8 343 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 TTC29Q8NA56 475 aaPredicted RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 BTBD9Q96Q07 612 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms