RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 EML3Q32P44 896 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 PDCL2Q8N4E4 241 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 ARL14EPQ8N8R7 260 aaPredicted RBP8.39□□□□□ -1.07
CLK1-215ENST00000621181 MDGA1Q8NFP4 955 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 SH3RF2Q8TEC5 729 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 LEO1Q8WVC0 666 aaPredicted RBP8.39□□□□□ -1.07
CLK1-215ENST00000621181 TRMT2BQ96GJ1 504 aaKnown RBP8.39□□□□□ -1.07
CLK1-215ENST00000621181 ACBD6Q9BR61 282 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 SCNM1Q9BWG6 230 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 DDX43Q9NXZ2 648 aaKnown RBP8.39□□□□□ -1.07
CLK1-215ENST00000621181 GTF3C4Q9UKN8 822 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 CACNA1EQ15878 2313 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 MYO16Q9Y6X6 1858 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 PCNX2A6NKB5 2137 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 PI4KAP42356 2102 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 C2orf78A6NCI8 922 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 TMEM8BA6NDV4 472 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 CDX4O14627 284 aaPredicted RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 NFATC1O95644 943 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 ITGB3P05106 788 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 HDCP19113 662 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 PLCG1P19174 1290 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 CSRP1P21291 193 aaKnown RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 POLR2BP30876 1174 aaKnown RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 MYL7Q01449 175 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 POU5F1Q01860 360 aaKnown RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 USP4Q13107 963 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 POSTNQ15063 836 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 INTS6LQ5JSJ4 861 aaKnown RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 NT5DC4Q86YG4 428 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 SPATA2LQ8IUW3 424 aaPredicted RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 SCN4BQ8IWT1 228 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 KRI1Q8N9T8 703 aaKnown RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 KDF1Q8NAX2 398 aaPredicted RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 USP33Q8TEY7 942 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 PIGKQ92643 395 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 CNOT6LQ96LI5 555 aaKnown RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 MYRFLQ96LU7 910 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 FIZ1Q96SL8 496 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 LINC00597Q9H2U6 94 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 L1RE1Q9UN81 338 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 AGAP1Q9UPQ3 857 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 STYXL1Q9Y6J8 313 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 FASNP49327 2511 aaKnown RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 LOC400499M0QZD8 3231 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 H3BQV1 296 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 SLC26A4O43511 780 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 ALDH1A2O94788 518 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 NOL4O94818 638 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 TOP3BO95985 862 aaKnown RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 TPM2P07951 284 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 KRT19P08727 400 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 PDIA4P13667 645 aaKnown RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 BCKDHBP21953 392 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 PCSK1P29120 753 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 PDE6CP51160 858 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 LMAN2Q12907 356 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 CRY1Q16526 586 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 FOXD4L6Q3SYB3 417 aaPredicted RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 CFAP221Q4G0U5 840 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 TRIM61Q5EBN2 209 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 FOXD4L3Q6VB84 417 aaPredicted RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 RASSF3Q86WH2 238 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 TMEM86AQ8N2M4 240 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 CCDC33Q8N5R6 958 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 RNF214Q8ND24 703 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 CACTINQ8WUQ7 758 aaKnown RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 LARP4BQ92615 738 aaKnown RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 RAD54LQ92698 747 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 SPACA7Q96KW9 195 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 FAM213AQ9BRX8 229 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 NUSAP1Q9BXS6 441 aaKnown RBP8.38□□□□□ -1.07
CLK1-215ENST00000621181 BLOC1S4Q9NUP1 217 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 CCDC39Q9UFE4 941 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 MMP17Q9ULZ9 603 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 WASF3Q9UPY6 502 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 ATP6V1DQ9Y5K8 247 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 SNX9Q9Y5X1 595 aa8.38□□□□□ -1.07
CLK1-215ENST00000621181 DSPP15924 2871 aaKnown RBP8.37□□□□□ -1.07
CLK1-215ENST00000621181 AKAP13Q12802 2813 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 ANAPC1Q9H1A4 1944 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 K7EQS6 105 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 LETM1O95202 739 aaPredicted RBP8.37□□□□□ -1.07
CLK1-215ENST00000621181 ADSSP30520 456 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 MAPK8P45983 427 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 DNM1Q05193 864 aaKnown RBP8.37□□□□□ -1.07
CLK1-215ENST00000621181 LMBRD2Q68DH5 695 aaPredicted RBP8.37□□□□□ -1.07
CLK1-215ENST00000621181 KIAA1211LQ6NV74 962 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 CRELD2Q6UXH1 353 aaPredicted RBP8.37□□□□□ -1.07
CLK1-215ENST00000621181 ARMCX6Q7L4S7 300 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 LPCAT2Q7L5N7 544 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 SFR1Q86XK3 245 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 ADGRF2Q8IZF7 708 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 CSGALNACT2Q8N6G5 542 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 C1orf127Q8N9H9 656 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 DEFB124Q8NES8 71 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 LRRC15Q8TF66 581 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 NOC3LQ8WTT2 800 aaKnown RBP8.37□□□□□ -1.07
CLK1-215ENST00000621181 RLN3Q8WXF3 142 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 ZCCHC14Q8WYQ9 949 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms