RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ARID3BQ8IVW6 561 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 YAF2Q8IY57 180 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 CMTM8Q8IZV2 173 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 SLC4A11Q8NBS3 891 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 STKLD1Q8NE28 680 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 PDZD8Q8NEN9 1154 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 ANKRD20A12PQ8NF67 263 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 KCNK16Q96T55 309 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 RPP25Q9BUL9 199 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 CSNK1G1Q9HCP0 422 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 OBP2AQ9NY56 170 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 PCDHB4Q9Y5E5 795 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 NRG2O14511 850 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 NARSO43776 548 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 PSMC3P17980 439 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 CACNA2D1P54289 1103 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 MFAP3P55082 362 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 MAP3K7CLP57077 242 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 TYRO3Q06418 890 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 EXOC3L4Q17RC7 722 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 SGO2Q562F6 1265 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 STXBP5Q5T5C0 1151 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 ARHGAP17Q68EM7 881 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 SMYD5Q6GMV2 418 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 POTEHQ6S545 545 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 MFSD6LQ8IWD5 586 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 MAB21L3Q8N8X9 362 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 ST13P5Q8NFI4 369 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 OVCA2Q8WZ82 227 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 PBXIP1Q96AQ6 731 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 SMOQ99835 787 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 TRMT61BQ9BVS5 477 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 SLC46A2Q9BY10 475 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 DUSP16Q9BY84 665 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 NDST4Q9H3R1 872 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 FBXO44Q9H4M3 255 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 PNPLA8Q9NP80 782 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 SAMSN1Q9NSI8 373 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 NOTCH4Q99466 2003 aa18.3■□□□□ 0.52
SHKBP1-212ENST00000596163 TRAV19A0A0A6YYK7 116 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 FAM86C2PA6NEL3 165 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 HEPACAM2A8MVW5 462 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 PES1O00541 588 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 CFHP08603 1231 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 PAEPP09466 180 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 VDRP11473 427 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 CD19P15391 556 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 NPR3P17342 541 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 FCARP24071 287 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 VIPR2P41587 438 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 USP46P62068 366 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 GPC5P78333 572 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 MYL5Q02045 173 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 IFRD2Q12894 506 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 SKOR2Q2VWA4 1001 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 TCP11X2Q5H9J9 407 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 PPP1R26Q5T8A7 1209 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 TXNDC8Q6A555 127 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 TMEM270Q6UE05 265 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 RRAGAQ7L523 313 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 CELF5Q8N6W0 485 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 UBR7Q8N806 425 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 ASIC4Q96FT7 647 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 LRFN3Q9BTN0 628 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 UBXN6Q9BZV1 441 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 MFSD1Q9H3U5 465 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 SMOC2Q9H3U7 446 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 KIF9Q9HAQ2 790 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 TRPC7Q9HCX4 862 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 UBE2TQ9NPD8 197 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 THG1LQ9NWX6 298 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 HESX1Q9UBX0 185 aa18.29■□□□□ 0.52
SHKBP1-212ENST00000596163 USP17L7P0C7H9 530 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 SLC5A3P53794 718 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 TAF10Q12962 218 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 ZNF268Q14587 947 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 STILQ15468 1287 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 HSP90AA4PQ58FG1 418 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 PHLDB3Q6NSJ2 640 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 TRIM65Q6PJ69 517 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 CLEC20AQ6ZU45 233 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 C11orf57Q6ZUT1 292 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 ARHGEF19Q8IW93 802 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 SUGP1Q8IWZ8 645 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 ANKRD52Q8NB46 1076 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 IRF7Q92985 503 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 FBXO32Q969P5 355 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 SHDQ96IW2 340 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 CRACR2AQ9BSW2 395 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 PLA2G2FQ9BZM2 168 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 BRD9Q9H8M2 597 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 C11orf16Q9NQ32 467 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 TMEM30AQ9NV96 361 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 IL37Q9NZH6 218 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 DOCK6Q96HP0 2047 aa18.28■□□□□ 0.52
SHKBP1-212ENST00000596163 DOCK8Q8NF50 2099 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 MUC3AQ02505 3323 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 ZNF840PA6NDX5 716 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 TNFRSF10BO14763 440 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 ZNF263O14978 683 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms