RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 AVPR1AP37288 418 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 ANP32AP39687 249 aaKnown RBP23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 MXI1P50539 228 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 STIM1Q13586 685 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 CBWD6Q4V339 395 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 ARHGAP29Q52LW3 1261 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 CBWD3Q5JTY5 395 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 CBWD5Q5RIA9 395 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 FAM35AQ86V20 835 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 WHAMMQ8TF30 809 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 CYP2S1Q96SQ9 504 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 IMPG2Q9BZV3 1241 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 CYP3A43Q9HB55 503 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 GCNT4Q9P109 453 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 MYO16Q9Y6X6 1858 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 CACNA1IQ9P0X4 2223 aa23.72■■□□□ 1.39
GTF2F1-204ENST00000594965 C2orf78A6NCI8 922 aa23.72■■□□□ 1.39
GTF2F1-204ENST00000594965 CCDC130P13994 396 aa23.72■■□□□ 1.39
GTF2F1-204ENST00000594965 HOXD11P31277 338 aaPredicted RBP23.72■■□□□ 1.39
GTF2F1-204ENST00000594965 TTI2Q6NXR4 508 aa23.72■■□□□ 1.39
GTF2F1-204ENST00000594965 ZNF852Q6ZMS4 543 aa23.72■■□□□ 1.39
GTF2F1-204ENST00000594965 FBXL13Q8NEE6 735 aa23.72■■□□□ 1.39
GTF2F1-204ENST00000594965 ATOH1Q92858 354 aaPredicted RBP23.72■■□□□ 1.39
GTF2F1-204ENST00000594965 NIF3L1Q9GZT8 377 aa23.72■■□□□ 1.39
GTF2F1-204ENST00000594965 TRPC7Q9HCX4 862 aa23.72■■□□□ 1.39
GTF2F1-204ENST00000594965 TDP1Q9NUW8 608 aa23.72■■□□□ 1.39
GTF2F1-204ENST00000594965 PIAS3Q9Y6X2 628 aa23.72■■□□□ 1.39
GTF2F1-204ENST00000594965 FANCMQ8IYD8 2048 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 STX10O60499 249 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 PPP1R2P41236 205 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 MLLT6P55198 1093 aaPredicted RBP23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 ZNF268Q14587 947 aaPredicted RBP23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 ANGPT1Q15389 498 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 DCAF17Q5H9S7 520 aaPredicted RBP23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 KLHL10Q6JEL2 608 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 ARL14EPQ8N8R7 260 aaPredicted RBP23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 C12orf29Q8N999 325 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 ZMIZ2Q8NF64 920 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 CSGALNACT1Q8TDX6 532 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 NELFBQ8WX92 580 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 SLC35C1Q96A29 364 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 CLDN23Q96B33 292 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 NELL2Q99435 816 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 FAM83CQ9BQN1 747 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 MED10Q9BTT4 135 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 IRF2BPLQ9H1B7 796 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 RAB20Q9NX57 234 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 GTSE1Q9NYZ3 720 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 COQ4Q9Y3A0 265 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 F5P12259 2224 aa23.71■■□□□ 1.39
GTF2F1-204ENST00000594965 ATP8B3O60423 1300 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 MAN2B1O00754 1011 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 CILPO75339 1184 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 BEST1O76090 585 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 SOX9P48436 509 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 TNK2Q07912 1038 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 TAF10Q12962 218 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 TCERG1LQ5VWI1 586 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 NUP93Q8N1F7 819 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 CCDC150Q8NCX0 1101 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 SLC2A14Q8TDB8 520 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 TATDN2Q93075 761 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 SMARCD1Q96GM5 515 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 CEP63Q96MT8 703 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 SMOQ99835 787 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 KIF9Q9HAQ2 790 aa23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 ARMCX3Q9UH62 379 aaPredicted RBP23.7■■□□□ 1.38
GTF2F1-204ENST00000594965 TRAV19A0A0A6YYK7 116 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 ZNF840PA6NDX5 716 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 TNFRSF10BO14763 440 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 USP17L7P0C7H9 530 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 CD58P19256 250 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 CAMK4Q16566 473 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 FOXR2Q6PJQ5 311 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 FILIP1Q7Z7B0 1213 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 TTC8Q8TAM2 541 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 FAM3CQ92520 227 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 KRT82Q9NSB4 513 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 FAM49BQ9NUQ9 324 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 IL37Q9NZH6 218 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 EHD2Q9NZN4 543 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 TRPM5Q9NZQ8 1165 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 CTNND2Q9UQB3 1225 aa23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 MRPS17Q9Y2R5 130 aaKnown RBP23.69■■□□□ 1.38
GTF2F1-204ENST00000594965 CACNA1HO95180 2353 aa23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 AP1G2O75843 785 aa23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 ZXDBP98169 803 aa23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 PLCB2Q00722 1185 aa23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 IFRD2Q12894 506 aaPredicted RBP23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 ZNF77Q15935 545 aa23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 TXNDC11Q6PKC3 985 aa23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 FRMD5Q7Z6J6 570 aa23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 ALYREFQ86V81 257 aaKnown RBP23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 SCAMP5Q8TAC9 235 aa23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 FAXDC2Q96IV6 333 aa23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 NT5C1AQ9BXI3 368 aa23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 CSNK1G1Q9HCP0 422 aa23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 DMAP1Q9NPF5 467 aaPredicted RBP23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 HPS4Q9NQG7 708 aa23.68■■□□□ 1.38
GTF2F1-204ENST00000594965 GKN1Q9NS71 199 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms