RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 TSPAN16Q9UKR8 245 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 CAPN7Q9Y6W3 813 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 H0YHG0 523 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 MCF2LO15068 1137 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 NPTXRO95502 500 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 ARL4CP56559 192 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 ACTN3Q08043 901 aaPredicted RBP20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 LACTB2Q53H82 288 aaPredicted RBP20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 TAX1BP1Q86VP1 789 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 MAP7D3Q8IWC1 876 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 BEST2Q8NFU1 509 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 HSPH1Q92598 858 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 DNAI2Q9GZS0 605 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 ZNF408Q9H9D4 720 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 EURLQ9NYK6 297 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 SENP1Q9P0U3 644 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 CLEC11AQ9Y240 323 aa20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 FARP1Q9Y4F1 1045 aaPredicted RBP20.08■□□□□ 0.81
PRKCSH-209ENST00000589838 C2CD4BA6NLJ0 364 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 PRPSAP2O60256 369 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 GHRP10912 638 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 PDGFRAP16234 1089 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 PHBP35232 272 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 CTCFP49711 727 aaPredicted RBP20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 EIF3EP60228 445 aaKnown RBP20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 MKRN3Q13064 507 aaKnown RBP20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 RASA2Q15283 850 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 HIF1AQ16665 826 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 GOLGA7BQ2TAP0 167 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 CATSPER4Q7RTX7 472 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 LRRC52Q8N7C0 313 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 CKAP2Q8WWK9 683 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 RXFP2Q8WXD0 754 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 BRI3BPQ8WY22 251 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 PARK7Q99497 189 aaKnown RBP20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 ADAMTS10Q9H324 1103 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 VPS37BQ9H9H4 285 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 GBA2Q9HCG7 927 aaPredicted RBP20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 TBK1Q9UHD2 729 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 ENDOD1O94919 500 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 STIP1P31948 543 aaKnown RBP20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 FKBP1BP68106 108 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 PDIA2Q13087 525 aaKnown RBP20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 NOTUMQ6P988 496 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 FAM183BPQ6ZVS7 135 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 ZBED8Q8IZ13 594 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 CYP4X1Q8N118 509 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 TMEM130Q8N3G9 435 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 MGARPQ8TDB4 240 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 MAML1Q92585 1016 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 CALN1Q9BXU9 219 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 HESX1Q9UBX0 185 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 SLC24A2Q9UI40 661 aa20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.07■□□□□ 0.8
PRKCSH-209ENST00000589838 SLC15A5A6NIM6 579 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 RASA4BC9J798 803 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 E5RJQ4 531 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 DPYSL4O14531 572 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 RASA4O43374 803 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 PDK2Q15119 407 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 TMED2Q15363 201 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 KIZQ2M2Z5 673 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 BOLA3Q53S33 107 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 UNC93AQ86WB7 457 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 SRRM1Q8IYB3 904 aaKnown RBP20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 ANKRD42Q8N9B4 389 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 SGSM3Q96HU1 749 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 SNX27Q96L92 541 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 SETD4Q9NVD3 440 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 TRIP11Q15643 1979 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 NRCAMQ92823 1304 aa20.06■□□□□ 0.8
PRKCSH-209ENST00000589838 CCT8L1PA6NM43 557 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 CD48P09326 243 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 TSHRP16473 764 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 CYP3A5P20815 502 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 AXLP30530 894 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 STX2P32856 288 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 RPL22P35268 128 aaKnown RBP20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 CDH6P55285 790 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 IRF5Q13568 498 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 FAM110CQ1W6H9 321 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 ZDHHC17Q8IUH5 632 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 STK32AQ8WU08 396 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 TSPAN18Q96SJ8 248 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 ELAC2Q9BQ52 826 aaKnown RBP20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 SNTG2Q9NY99 539 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 SAE1Q9UBE0 346 aaPredicted RBP20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 FETUBQ9UGM5 382 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 SNX9Q9Y5X1 595 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 SMIM35A0A1B0GVV1 85 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 PFKMP08237 780 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 RBP3P10745 1247 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 CREB1P16220 341 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 HOXA11P31270 313 aaPredicted RBP20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 LRRC14Q15048 493 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 SESTD1Q86VW0 696 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 NAT8LQ8N9F0 302 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 PYROXD1Q8WU10 500 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 TEKT4Q8WW24 435 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 CPT1BQ92523 772 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms