RNA–Protein interactions for RNA: ENST00000587190.5

NEDD4L-216, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4L, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-216ENST00000587190 USTQ9Y2C2 406 aa12.88□□□□□ -0.35
NEDD4L-216ENST00000587190 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.88□□□□□ -0.35
NEDD4L-216ENST00000587190 TIMM13Q9Y5L4 95 aaPredicted RBP12.88□□□□□ -0.35
NEDD4L-216ENST00000587190 TBKBP1A7MCY6 615 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 E5RJQ4 531 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 TMEM189-UBE2V1I3L0A0 370 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 M0QZQ0 153 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 GABRDO14764 452 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 DDX3YO15523 660 aaKnown RBP12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 TRAPPC3O43617 180 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 DDHD2O94830 711 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 FAM200BP0CF97 657 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 KRT3P12035 628 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 TYMPP19971 482 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 PSMA2P25787 234 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 CTNNA1P35221 906 aaKnown RBP12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 GJC1P36383 396 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 GATMP50440 423 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 TSPY1Q01534 308 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 PDE4CQ08493 712 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 IKBKEQ14164 716 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 ZNF268Q14587 947 aaPredicted RBP12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 CLUL1Q15846 466 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 ERCC6LQ2NKX8 1250 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 OVOS1Q6IE37 1185 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 FAM183BPQ6ZVS7 135 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 XYLT1Q86Y38 959 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 ZNF280BQ86YH2 543 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 COLGALT2Q8IYK4 626 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 ANKRD52Q8NB46 1076 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 MS4A14Q96JA4 679 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 LPIN3Q9BQK8 851 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 TRIM7Q9C029 511 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 EHD2Q9NZN4 543 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 TJP2Q9UDY2 1190 aa12.87□□□□□ -0.35
NEDD4L-216ENST00000587190 SIGLEC16A6NMB1 481 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 PDE2AO00408 941 aaPredicted RBP12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 PIK3R2O00459 728 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 PSTPIP1O43586 416 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 ATP2C2O75185 946 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 TADA2AO75478 443 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 CYP11A1P05108 521 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 PFKMP08237 780 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 RAG1P15918 1043 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 NPR3P17342 541 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 IGFBP6P24592 240 aaPredicted RBP12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 TKTP29401 623 aaKnown RBP12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 ACADSBP45954 432 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 GABRB2P47870 512 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 MARCKSL1P49006 195 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 RWDD2BP57060 319 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 COPS2P61201 443 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 RPL7AP62424 266 aaKnown RBP12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 PIGHQ14442 188 aaPredicted RBP12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 TCTN1Q2MV58 587 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 PKDCCQ504Y2 493 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 ZFYVE27Q5T4F4 411 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 RSRC2Q7L4I2 434 aaKnown RBP12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 ZNF572Q7Z3I7 529 aaPredicted RBP12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 FAM35AQ86V20 835 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 TSC1Q92574 1164 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 RNPC3Q96LT9 517 aaKnown RBP12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 CASD1Q96PB1 797 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 NAP1L3Q99457 506 aaPredicted RBP12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 HNRNPABQ99729 332 aaKnown RBP12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 CYLDQ9NQC7 956 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 SMARCAL1Q9NZC9 954 aa12.86□□□□□ -0.35
NEDD4L-216ENST00000587190 GOLGA6L10A0A0M3HER8 536 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 TCRBV5S1A1TA0A578 114 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 TMEM191CA6NGB0 347 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 XPO1O14980 1071 aaKnown RBP12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 B4GALT3O60512 393 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 ITGB1P05556 798 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 GPD1P21695 349 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 PLA2G4AP47712 749 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 RNASE9P60153 205 aaKnown RBP12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 PLCB3Q01970 1234 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 YWHAHQ04917 246 aaPredicted RBP12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 ITIH3Q06033 890 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 ZNF211Q13398 564 aaPredicted RBP12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 MAPRE1Q15691 268 aaKnown RBP12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 ODF2Q5BJF6 829 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 INTS6LQ5JSJ4 861 aaKnown RBP12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 PMF1Q6P1K2 205 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 CPNE8Q86YQ8 564 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 ZDHHC17Q8IUH5 632 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 RHOT1Q8IXI2 618 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 FUKQ8N0W3 1084 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 MYCBPAPQ8TBZ2 947 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 ACTRT1Q8TDG2 376 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 STK32AQ8WU08 396 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 SLC35F5Q8WV83 523 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 KRT35Q92764 455 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 CD101Q93033 1021 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 MYLPFQ96A32 169 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 MCRS1Q96EZ8 462 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 SMARCD1Q96GM5 515 aa12.85□□□□□ -0.35
NEDD4L-216ENST00000587190 TMEM175Q9BSA9 504 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms